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scnpilot_solids2_trim150_scaffold_1837

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1837_1
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2..1198
DNA (1197bp) protein (399aa)
Uncharacterized protein id=1731244 bin=GWD2_Bacteroidales_45_23 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Outer membrane receptor proteins, mostly Fe transport
Tax=GWC2_Bacteroidetes_46_850_curated
scnpilot_solids2_trim150_scaffold_1837_2
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1215..2441
DNA (1227bp) protein (409aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035C3A8B rbh
hypothetical protein rbh
Tax=GWC2_Bacteroidetes_46_850_curated
scnpilot_solids2_trim150_scaffold_1837_3
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

2647..3558
DNA (912bp) protein (304aa)
metallophosphoesterase (EC:3.6.1.-) rbh
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000371C438 rbh
Tax=BJP_IG2103_Bacteroidetes_41_9
scnpilot_solids2_trim150_scaffold_1837_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3603..4055
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TEE6_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98356.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1837_5
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4339..5562)
DNA (1224bp) protein (408aa)
Peptidase S41 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRR0_CHIPD rbh
peptidase S41 rbh
Peptidase S41 {ECO:0000313|EMBL:ACU58953.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_1837_6
unknown

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comp(5568..5747)
DNA (180bp) protein (60aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1837_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

6107..6511
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003657DFA
hypothetical protein; K02197 cytochrome c-type biogenesis protein CcmE
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_1837_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

6798..8084
DNA (1287bp) protein (429aa)
Cytochrome c assembly protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQZ1_NIAKG
cytochrome c assembly protein; K02198 cytochrome c-type biogenesis protein CcmF
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_1837_9
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8074..8715
DNA (642bp) protein (214aa)
Cytochrome c assembly protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PPB1_CHIPD
Putative cytochrome c biogenesis protein {ECO:0000313|EMBL:GAO44474.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
cytochrome C assembly protein; K02198 cytochrome c-type biogenesis protein CcmF
scnpilot_solids2_trim150_scaffold_1837_10
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8819..9430
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQZ2_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:GAO44475.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1837_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9523..10185
DNA (663bp) protein (221aa)
LmbE family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH31_NIAKG
LmbE family protein
LmbE family protein {ECO:0000313|EMBL:AEW00642.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1837_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10365..10895
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035C1232
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97585.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1837_13
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10892..11491)
DNA (600bp) protein (200aa)
HAD-superfamily subfamily IB hydrolase, TIGR01490 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PE09_CHIPD
HAD-superfamily hydrolase
HAD-superfamily subfamily IB hydrolase, TIGR01490 {ECO:0000313|EMBL:ACU61509.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_1837_14
candidate division TM7 genomosp. GTL1, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(11488..12375)
DNA (888bp) protein (296aa)
UbiA prenyltransferase n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KSJ0_9BACT rbh
UbiA prenyltransferase {ECO:0000313|EMBL:EDK72595.1}; TaxID=443342 species="Bacteria; Candidatus Saccharibacteria.;" source="candidate division TM7 genomosp. GTL1.;"
UbiA prenyltransferase
scnpilot_solids2_trim150_scaffold_1837_15
unknown

Not on your lists

comp(12388..13536)
DNA (1149bp) protein (383aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI00037DD1B4
scnpilot_solids2_trim150_scaffold_1837_16
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

comp(13496..14155)
DNA (660bp) protein (220aa)
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
scnpilot_solids2_trim150_scaffold_1837_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14372..15649)
DNA (1278bp) protein (426aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036847D9
major facilitator superfamily protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
scnpilot_solids2_trim150_scaffold_1837_18
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

Not on your lists

comp(15676..18246)
DNA (2571bp) protein (857aa)
glycoside hydrolase; K15855 exo-1,4-beta-D-glucosaminidase [EC:3.2.1.165] rbh
Glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich id=8266218 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CD_OP8_4m organism_group=OP8 (Aminicenantes) rbh
Tax=RBG_16_Aminicenantes_63_16_curated
scnpilot_solids2_trim150_scaffold_1837_19
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18585..20237
DNA (1653bp) protein (551aa)
SSS sodium solute transporter superfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCP9_NIAKG rbh
Na+/galactose cotransporter {ECO:0000313|EMBL:KIA94410.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
SSS sodium solute transporter superfamily protein rbh
scnpilot_solids2_trim150_scaffold_1837_20
unknown

Not on your lists

20243..20449
DNA (207bp) protein (69aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1837_21
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

20578..21495
DNA (918bp) protein (306aa)
Hexose kinase, 1-phosphofructokinase family n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0FR84_ECHVK
hexose kinase
Hexose kinase, 1-phosphofructokinase family {ECO:0000313|EMBL:AGA76454.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
scnpilot_solids2_trim150_scaffold_1837_22
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(21596..21871)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQT4_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_1837_23
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21868..22128)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQT4_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC93149.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1837_24
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22177..22782)
DNA (606bp) protein (202aa)
peptide methionine sulfoxide reductase; K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037F7231
scnpilot_solids2_trim150_scaffold_1837_25
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22835..23557)
DNA (723bp) protein (241aa)
acyl transferase n=1 Tax=Mesoflavibacter zeaxanthinifaciens RepID=UPI000255AFA7
Acyl transferase {ECO:0000313|EMBL:KIC93471.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
acyl-CoA synthetase
scnpilot_solids2_trim150_scaffold_1837_26
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

23720..24157
DNA (438bp) protein (146aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_1837_27
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24386..25489
DNA (1104bp) protein (368aa)
Cellulase n=1 Tax=Niabella soli DSM 19437 RepID=H1NRM5_9SPHI
Peptidase M42 family protein {ECO:0000313|EMBL:GAO43415.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
cellulase
scnpilot_solids2_trim150_scaffold_1837_28
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25623..26168
DNA (546bp) protein (182aa)
Pyruvate dehydrogenase (acetyl-transferring), 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring); K11381 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
Pyruvate dehydrogenase (Acetyl-transferring), 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) {ECO:0000313|EMBL:AEV96584.1}; EC=1.2.4.1 {ECO:0000313|EMBL:AEV96584.1};; EC=1.2.4.4 {ECO:0000313|EMBL:AEV96584.1};; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Pyruvate dehydrogenase (Acetyl-transferring), 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLL5_NIAKG
scnpilot_solids2_trim150_scaffold_1837_29
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26197..27576
DNA (1380bp) protein (460aa)
Pyruvate dehydrogenase (acetyl-transferring), 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring); K11381 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
Pyruvate dehydrogenase (Acetyl-transferring), 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) {ECO:0000313|EMBL:AEV96584.1}; EC=1.2.4.1 {ECO:0000313|EMBL:AEV96584.1};; EC=1.2.4.4 {ECO:0000313|EMBL:AEV96584.1};; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Pyruvate dehydrogenase (Acetyl-transferring), 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLL5_NIAKG
scnpilot_solids2_trim150_scaffold_1837_30
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27608..27985)
DNA (378bp) protein (126aa)
response regulator receiver n=1 Tax=Cytophagales str. B6 RepID=UPI0003B69817
Response regulator receiver protein {ECO:0000313|EMBL:EHQ29607.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Displaying items 1-30 of 50 in total

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