ggKbase home page

scnpilot_solids2_trim150_scaffold_272

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_272_1
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

comp(579..1355)
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000362690D rbh
restriction endonuclease; K07454 putative restriction endonuclease
Tax=BJP_IG2103_Bacteroidetes_37_22
scnpilot_solids2_trim150_scaffold_272_2
unknown

Not on your lists

comp(1352..1585)
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI000361C774
scnpilot_solids2_trim150_scaffold_272_3
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1917..2819)
DNA (903bp) protein (301aa)
1,4-dihydroxy-2-naphthoateoctaprenyltransferase; K02548 1,4-dihydroxy-2-naphthoate octaprenyltransferase [EC:2.5.1.74 2.5.1.-]
1,4-dihydroxy-2-naphthoate prenyltransferase n=1 Tax=Aquimarina agarilytica RepID=UPI000288F46F rbh
Tax=GWB2_Bacteroidetes_41_8_curated
scnpilot_solids2_trim150_scaffold_272_4
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(2970..3815)
DNA (846bp) protein (282aa)
1,4-dihydroxy-2-naphthoate synthase (EC:4.1.3.36); K01661 naphthoate synthase [EC:4.1.3.36]
1,4-dihydroxy-6-naphthoate synthase n=1 Tax=Flexithrix dorotheae RepID=UPI0003721972
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_solids2_trim150_scaffold_272_5
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3799..5511)
DNA (1713bp) protein (571aa)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase {ECO:0000256|HAMAP-Rule:MF_01659, ECO:0000256|SAAS:SAAS00056887}; Short=SEPHCHC synthase {ECO:0000256|HAMAP-Rule:MF_01659};; EC=2.2.1.9 {ECO:0000256|HAMAP-Rule:MF_01659, ECO:0000256|SAAS:SAAS00056850};; Menaquinone biosynthesis protein MenD {ECO:0000256|HAMAP-Rule:MF_01659}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrinis fermentans DSM 9555 = JCM 211
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase (EC:2.2.1.9)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=1 Tax=Myroides odoratimimus CCUG 3837 RepID=K1IE22_9FLAO rbh
scnpilot_solids2_trim150_scaffold_272_6
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5495..6664)
DNA (1170bp) protein (390aa)
isochorismate synthase entC; K02361 isochorismate synthase [EC:5.4.4.2]
Isochorismate synthase n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PWC6_9BACE
Isochorismate synthase {ECO:0000313|EMBL:EGF52475.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus YIT 12057.;"
scnpilot_solids2_trim150_scaffold_272_7
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7024..9738
DNA (2715bp) protein (905aa)
mgtA; magnesium-importing ATPase (EC:3.6.3.2); K01531 Mg2+-importing ATPase [EC:3.6.3.2]
Magnesium-transporting ATPase n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0ME91_9SPHI
Contig59, whole genome shotgun sequence {ECO:0000313|EMBL:KIO76598.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
scnpilot_solids2_trim150_scaffold_272_8
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9936..10334
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KQD6_SOLCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD06552.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_solids2_trim150_scaffold_272_9
RLO_Flavobacteria_35_11, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10417..10662
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0002FDF561
Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
scnpilot_solids2_trim150_scaffold_272_10
unknown

Not on your lists

comp(10659..10778)
DNA (120bp) protein (40aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_272_11
unknown

Not on your lists

comp(10765..10914)
DNA (150bp) protein (50aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_272_12
unknown

Not on your lists

comp(11133..11285)
DNA (153bp) protein (51aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_272_13
unknown

Not on your lists

11645..11887
DNA (243bp) protein (81aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_272_14
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12013..12456
DNA (444bp) protein (148aa)
Putative membrane protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CGY3_9GAMM
Putative membrane protein {ECO:0000313|EMBL:EIJ42876.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
RDD domain containing protein
scnpilot_solids2_trim150_scaffold_272_15
BJP_IG2102_Flavobacteriales_34_12, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12614..14608)
DNA (1995bp) protein (665aa)
Outer membrane receptor (OMR) family transporter n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RYN7_9FLAO
outer membrane receptor (OMR) family transporter; K02014 iron complex outermembrane recepter protein
Tax=BJP_IG2102_Flavobacteriales_34_12
scnpilot_solids2_trim150_scaffold_272_16
BJP_IG2102_Flavobacteriales_34_12, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14712..15584)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RZZ6_9FLAO
hypothetical protein
Tax=BJP_IG2102_Flavobacteriales_34_12
scnpilot_solids2_trim150_scaffold_272_17
unknown

Not on your lists

comp(15691..15924)
DNA (234bp) protein (78aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_272_18
unknown

Not on your lists

comp(16166..16333)
DNA (168bp) protein (56aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_272_19
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(16517..19054)
DNA (2538bp) protein (846aa)
alpha-glucan phosphorylase; K00688 starch phosphorylase [EC:2.4.1.1]
Alpha-glucan phosphorylase n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J1N6_CYCMS
Alpha-glucan phosphorylase {ECO:0000313|EMBL:AEL28245.1}; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;"
scnpilot_solids2_trim150_scaffold_272_20
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19087..21519)
DNA (2433bp) protein (811aa)
phosphoenolpyruvate synthase; K01007 pyruvate, water dikinase [EC:2.7.9.2]
Phosphoenolpyruvate synthase {ECO:0000256|PIRNR:PIRNR000854}; Short=PEP synthase {ECO:0000256|PIRNR:PIRNR000854};; EC=2.7.9.2 {ECO:0000256|PIRNR:PIRNR000854};; Pyruvate, water dikinase {ECO:0000256|PIRNR:PIRNR000854}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Phosphoenolpyruvate synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBV9_NIAKG
scnpilot_solids2_trim150_scaffold_272_21
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21726..22169
DNA (444bp) protein (148aa)
Heat shock protein Hsp20 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBW0_NIAKG
heat shock protein Hsp20; K13993 HSP20 family protein
Heat shock protein Hsp20 {ECO:0000313|EMBL:AEV98242.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_272_22
unknown

Not on your lists

22448..22756
DNA (309bp) protein (103aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_272_23
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22783..23844)
DNA (1062bp) protein (354aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Niabella soli DSM 19437 RepID=H1NNE3_9SPHI
Transcriptional regulator {ECO:0000313|EMBL:AHF15300.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Crp/Fnr family transcriptional regulator
scnpilot_solids2_trim150_scaffold_272_24
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23841..25436)
DNA (1596bp) protein (532aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Niabella soli DSM 19437 RepID=H1NNE4_9SPHI
PAS/PAC sensor signal transduction histidine kinase
scnpilot_solids2_trim150_scaffold_272_25
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25935..27059)
DNA (1125bp) protein (375aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YBB9_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ31173.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_272_26
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27297..28121
DNA (825bp) protein (275aa)
UspA domain-containing protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJU0_NIAKG
UspA domain-containing protein
UspA domain-containing protein {ECO:0000313|EMBL:AEW01838.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_272_27
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

28227..28913
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037ADA85 rbh
Dehydrogenase {ECO:0000313|EMBL:EJF08584.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
short-chain dehydrogenase/reductase SDR
scnpilot_solids2_trim150_scaffold_272_trna_1
unknown

Not on your lists

29404..29475
DNA (72bp)
transferRNA Arg
scnpilot_solids2_trim150_scaffold_272_28
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29618..30727
DNA (1110bp) protein (370aa)
Peroxiredoxin n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KXJ7_SOLCM
peroxiredoxin
Peroxiredoxin {ECO:0000313|EMBL:AFD05293.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_solids2_trim150_scaffold_272_29
unknown

Not on your lists

comp(30753..30857)
DNA (105bp) protein (35aa)

This feature has no annotations

Displaying items 1-30 of 57 in total

View Taxonomy