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scnpilot_solids2_trim150_scaffold_3331

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3331_1
unknown

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comp(3..77)
DNA (75bp) protein (25aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_3331_2
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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275..934
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KUF8_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL28167.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
neuraminidase; K09807 hypothetical protein
scnpilot_solids2_trim150_scaffold_3331_3
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(968..2476)
DNA (1509bp) protein (503aa)
ATP-binding protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034819C8 rbh
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
hflX; GTPase; K03665 GTP-binding protein HflX rbh
scnpilot_solids2_trim150_scaffold_3331_4
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2549..3193
DNA (645bp) protein (215aa)
16S RNA G1207 methylase RsmC n=1 Tax=Microbacterium sp. TS-1 RepID=U2X7V6_9MICO rbh
16S rRNA methyltransferase {ECO:0000313|EMBL:KDA05795.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
16S RNA G1207 methylase RsmC rbh
scnpilot_solids2_trim150_scaffold_3331_5
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(3215..4087)
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034C4383 rbh
diaminopimelate epimerase rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids2_trim150_scaffold_3331_6
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4098..4643)
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034D6037
Uncharacterized protein {ECO:0000313|EMBL:KJQ53057.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
bifunctional deaminase-reductase-like protein
scnpilot_solids2_trim150_scaffold_3331_7
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4669..5583)
DNA (915bp) protein (305aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase; K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] rbh
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000378175C rbh
scnpilot_solids2_trim150_scaffold_3331_8
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5630..7177)
DNA (1548bp) protein (516aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
(dimethylallyl)adenosine tRNA methylthiotransferase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00035D1395 rbh
2-methylthioadenine synthetase rbh
Displaying 8 items

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