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scnpilot_solids2_trim150_scaffold_101

Search features with annotation key words

Displaying items 91-109 of 109 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_101_91
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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91062..95729
-----------------
DNA (4668bp)
protein (1556aa)
Endonuclease YhcR {ECO:0000313|EMBL:KJL22553.1}; EC=3.1.31.- {ECO:0000313|EMBL:KJL22553.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
the 5'-nucleotidase domain; K01081 5'-nucleotidase [EC:3.1.3.5]
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00030A1218 rbh
scnpilot_solids2_trim150_scaffold_101_92
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

95871..96350
-----------------
DNA (480bp)
protein (160aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002FB6A07
Uncharacterized protein {ECO:0000313|EMBL:KJQ55025.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_101_93
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

96347..97933
-----------------
DNA (1587bp)
protein (529aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
guaA; GMP synthase, PP-ATPase domain/subunit; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] rbh
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KTN4_9MICO rbh
scnpilot_solids2_trim150_scaffold_101_94
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

97939..99312
-----------------
DNA (1374bp)
protein (458aa)
Putative poly(Glycerol-phosphate) alpha-glucosyltransferase {ECO:0000313|EMBL:KJL29359.1}; EC=2.4.1.52 {ECO:0000313|EMBL:KJL29359.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034516B0 rbh
glycosyltransferase rbh
scnpilot_solids2_trim150_scaffold_101_95
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(99496..99762)
-----------------
DNA (267bp)
protein (89aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034B444C
Uncharacterized protein {ECO:0000313|EMBL:KJL23607.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
integral membrane protein
scnpilot_solids2_trim150_scaffold_101_96
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(99914..100870)
-----------------
DNA (957bp)
protein (319aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E47B10 rbh
Membrane protein {ECO:0000313|EMBL:KDA06417.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_101_97
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

100933..101943
-----------------
DNA (1011bp)
protein (337aa)
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:KJL23605.1}; EC=3.1.4.46 {ECO:0000313|EMBL:KJL23605.1};; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
glycerophosphoryl diester phosphodiesterase; K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] rbh
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000344CB89 rbh
scnpilot_solids2_trim150_scaffold_101_98
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(101958..102356)
-----------------
DNA (399bp)
protein (133aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000349AC96
Uncharacterized protein {ECO:0000313|EMBL:KDA06421.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
scnpilot_solids2_trim150_scaffold_101_99
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

102531..104993
-----------------
DNA (2463bp)
protein (821aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
uvrD; superfamily I DNA and RNA helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] rbh
ATP-dependent DNA helicase II n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KRE8_9MICO rbh
scnpilot_solids2_trim150_scaffold_101_100
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

105053..106186
-----------------
DNA (1134bp)
protein (378aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KTL9_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:KDA06424.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
signal transduction histidine kinase
scnpilot_solids2_trim150_scaffold_101_101
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

106257..107321
-----------------
DNA (1065bp)
protein (355aa)
Putative ATP-dependent DNA ligase YkoU {ECO:0000313|EMBL:KJL23302.1}; EC=6.5.1.1 {ECO:0000313|EMBL:KJL23302.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
eukaryotic-type DNA primase; K01971 DNA ligase (ATP) [EC:6.5.1.1] rbh
ATP-dependent DNA ligase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034C2D40 rbh
scnpilot_solids2_trim150_scaffold_101_102
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(107322..108317)
-----------------
DNA (996bp)
protein (332aa)
ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1] rbh
ATP-dependent DNA ligase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003490F70 rbh
Putative DNA ligase-like protein {ECO:0000313|EMBL:KJL23303.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
scnpilot_solids2_trim150_scaffold_101_103
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

108333..109505
-----------------
DNA (1173bp)
protein (391aa)
Integrase family protein n=1 Tax=Mycobacterium tusciae JS617 RepID=H1K9T6_9MYCO rbh
phage integrase family protein rbh
Site-specific recombinase XerD {ECO:0000313|EMBL:AEV73466.1}; TaxID=710685 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae (strain NBB3).;"
scnpilot_solids2_trim150_scaffold_101_104
unknown

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comp(109631..109840)
-----------------
DNA (210bp)
protein (70aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_101_105
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

110096..112057
-----------------
DNA (1962bp)
protein (654aa)
Integrase family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CLQ3_PSEUX rbh
integrase protein rbh
Integrase family protein {ECO:0000313|EMBL:AEA28185.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
scnpilot_solids2_trim150_scaffold_101_106
Arthrobacter sp. AK-YN10, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

112102..113202
-----------------
DNA (1101bp)
protein (367aa)
ATP dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1] rbh
ATP-dependent DNA ligase n=1 Tax=Agromyces italicus RepID=UPI0003B492B8 rbh
ATP-dependent DNA ligase {ECO:0000313|EMBL:ERI37126.2}; TaxID=1349820 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. AK-YN10.;"
scnpilot_solids2_trim150_scaffold_101_107
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

113464..114312
-----------------
DNA (849bp)
protein (283aa)
Tax=GWA2_Bacteroidetes_30_7_curated
scnpilot_solids2_trim150_scaffold_101_108
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

114309..117434
-----------------
DNA (3126bp)
protein (1042aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB54967.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
DEAD/DEAH box helicase id=4668351 bin=GWF2_Lentisphaerae_50_93 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S rbh
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_101_109
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(118021..118248)
-----------------
DNA (228bp)
protein (76aa)
Multidrug resistance protein MdtL {ECO:0000313|EMBL:KJL28301.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
Displaying items 91-109 of 109 in total

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