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scnpilot_solids2_trim150_scaffold_101

Search features with annotation key words

Displaying items 1-30 of 109 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_101_1
unknown

Not on your lists

2..124
-----------------
DNA (123bp)
protein (41aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_101_2
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

305..2059
-----------------
DNA (1755bp)
protein (585aa)
Putative cell surface protein n=1 Tax=Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 RepID=M5B756_9MICO rbh
Contig_4, whole genome shotgun sequence {ECO:0000313|EMBL:KIP94926.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
wcoA; putative cell surface protein rbh
scnpilot_solids2_trim150_scaffold_101_3
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2052..3110)
-----------------
DNA (1059bp)
protein (353aa)
Glycosyl transferase group 1 n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XKT3_NAKMY
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ACV80740.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_101_4
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3253..4410)
-----------------
DNA (1158bp)
protein (386aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000348A447 rbh
Glycosyl transferases group 1 {ECO:0000313|EMBL:KJL19294.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
glycosyltransferase rbh
scnpilot_solids2_trim150_scaffold_101_5
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4445..5977)
-----------------
DNA (1533bp)
protein (511aa)
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase {ECO:0000313|EMBL:KJL21414.1}; EC=2.7.8.31 {ECO:0000313|EMBL:KJL21414.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00031A6345 rbh
wcoC; putative undecaprenyl-phosphate sugar phosphotransferase rbh
scnpilot_solids2_trim150_scaffold_101_6
unknown

Not on your lists

comp(5987..6088)
-----------------
DNA (102bp)
protein (34aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_101_7
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6204..6686)
-----------------
DNA (483bp)
protein (161aa)
Glycerol-3-phosphate cytidylyltransferase {ECO:0000313|EMBL:KJL29518.1}; EC=2.7.7.39 {ECO:0000313|EMBL:KJL29518.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
cytidyltransferase-related enzyme; K00980 glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39]
Cytidyltransferase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KGZ6_9MICO
scnpilot_solids2_trim150_scaffold_101_8
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6838..7374
-----------------
DNA (537bp)
protein (179aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00030D2C44
VanZ like family protein {ECO:0000313|EMBL:KJL22347.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
glycopeptide antibiotics resistance protein
scnpilot_solids2_trim150_scaffold_101_9
unknown

Not on your lists

7617..8780
-----------------
DNA (1164bp)
protein (388aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_101_10
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8777..9781)
-----------------
DNA (1005bp)
protein (335aa)
Acyltransferase-like protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SDP2_METPP
acyltransferase
Acyltransferase-like protein {ECO:0000313|EMBL:ABM93681.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
scnpilot_solids2_trim150_scaffold_101_11
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10042..11436
-----------------
DNA (1395bp)
protein (465aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEE6C
Uncharacterized protein {ECO:0000313|EMBL:KGM08824.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
polysaccharide biosynthesis protein
scnpilot_solids2_trim150_scaffold_101_12
unknown

Not on your lists

comp(11518..12681)
-----------------
DNA (1164bp)
protein (388aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_101_13
unknown

Not on your lists

13130..14254
-----------------
DNA (1125bp)
protein (375aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_101_14
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

Not on your lists

comp(14261..15040)
-----------------
DNA (780bp)
protein (260aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YWA5_9BACT rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:CCQ89758.1}; TaxID=1266370 species="Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitrospinaceae; Nitrospina.;" source="Nitrospina gracilis (strain 3/211).;"
short-chain dehydrogenase/reductase SDR rbh
scnpilot_solids2_trim150_scaffold_101_15
Synechococcus sp. WH 8102, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(15037..15741)
-----------------
DNA (705bp)
protein (235aa)
acylneuraminate cytidylyltransferase (EC:2.7.7.43); K00983 N-acylneuraminate cytidylyltransferase [EC:2.7.7.43]
Putative acylneuraminate cytidylyltransferase {ECO:0000313|EMBL:CAE06959.1}; EC=2.7.7.43 {ECO:0000313|EMBL:CAE06959.1};; TaxID=84588 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain WH8102).;"
Putative acylneuraminate cytidylyltransferase n=1 Tax=Synechococcus sp. (strain WH8102) RepID=Q7U915_SYNPX
scnpilot_solids2_trim150_scaffold_101_16
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

Not on your lists

comp(15744..16742)
-----------------
DNA (999bp)
protein (333aa)
Putative oxidoreductase, GFO/Idh/MocA family protein n=1 Tax=Nitrospina gracilis 3/211 RepID=M1Z9C4_9BACT
Putative oxidoreductase, GFO/Idh/MocA family protein {ECO:0000313|EMBL:CCQ89755.1}; TaxID=1266370 species="Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitrospinaceae; Nitrospina.;" source="Nitrospina gracilis (strain 3/211).;"
oxidoreductase, GFO/Idh/MocA family protein
scnpilot_solids2_trim150_scaffold_101_17
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16775..17395
-----------------
DNA (621bp)
protein (207aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00036C2621
Serine acetyltransferase {ECO:0000313|EMBL:EWT01124.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
transferase
scnpilot_solids2_trim150_scaffold_101_18
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17411..18442
-----------------
DNA (1032bp)
protein (344aa)
N-acetylneuraminate synthase (EC:2.5.1.56); K01654 N-acetylneuraminate synthase [EC:2.5.1.56] rbh
N-acetylneuraminate synthase n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SFN4_INTC7 rbh
N-acetylneuraminate synthase {ECO:0000313|EMBL:KJK10287.1}; TaxID=1619947 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
scnpilot_solids2_trim150_scaffold_101_19
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18442..19578
-----------------
DNA (1137bp)
protein (379aa)
UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SFN5_INTC7 rbh
UDP-N-acetyl-D-glucosamine 2-epimerase rbh
UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing {ECO:0000313|EMBL:ADU47780.1}; TaxID=710696 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
scnpilot_solids2_trim150_scaffold_101_20
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19581..20645
-----------------
DNA (1065bp)
protein (355aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI000367C1E2 rbh
Nucleotidyl transferase {ECO:0000313|EMBL:EWT01127.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
nucleotidyl transferase rbh
scnpilot_solids2_trim150_scaffold_101_21
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20642..21667
-----------------
DNA (1026bp)
protein (342aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SFN7_INTC7 rbh
NAD-dependent epimerase/dehydratase rbh
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ADU47782.1}; TaxID=710696 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
scnpilot_solids2_trim150_scaffold_101_22
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21664..22809
-----------------
DNA (1146bp)
protein (382aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI000375D17D rbh
Pyridoxal phosphate-dependent aminotransferase {ECO:0000313|EMBL:EWT01129.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
DegT/DnrJ/EryC1/StrS aminotransferase rbh
scnpilot_solids2_trim150_scaffold_101_23
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22868..24880)
-----------------
DNA (2013bp)
protein (671aa)
O-acetyltransferase OatA {ECO:0000313|EMBL:KJL22334.1}; EC=2.3.1.- {ECO:0000313|EMBL:KJL22334.1};; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
UPI0003C7ED39 related cluster n=1 Tax=unknown RepID=UPI0003C7ED39
acyltransferase 3
scnpilot_solids2_trim150_scaffold_101_24
Geobacillus stearothermophilus, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24988..25758)
-----------------
DNA (771bp)
protein (257aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8AEJ1_CITK8
Exopolysaccharide biosynthesis protein {ECO:0000313|EMBL:EZP75266.1}; TaxID=1295642 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus stearothermophilus NUB3621.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_101_25
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25989..27422
-----------------
DNA (1434bp)
protein (478aa)
Putative sugar transferase EpsL {ECO:0000313|EMBL:KJL22338.1}; EC=2.-.-.- {ECO:0000313|EMBL:KJL22338.1};; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00036A8633 rbh
wcnC; undecaprenyl-phosphate sugar phosphotransferase rbh
scnpilot_solids2_trim150_scaffold_101_26
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27552..29585
-----------------
DNA (2034bp)
protein (678aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI000348047C rbh
hypothetical protein rbh
Uncharacterized conserved protein containing a ferredoxin-like domain {ECO:0000313|EMBL:BAJ73891.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_solids2_trim150_scaffold_101_27
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29867..30649)
-----------------
DNA (783bp)
protein (261aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003625872 rbh
Alkaline phosphatase synthesis transcriptional regulatory protein PhoP {ECO:0000313|EMBL:KJL31180.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
two-component system response regulator
scnpilot_solids2_trim150_scaffold_101_28
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30777..31904)
-----------------
DNA (1128bp)
protein (376aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003476E76
Uncharacterized protein {ECO:0000313|EMBL:KDA04901.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
GGDEF domain
scnpilot_solids2_trim150_scaffold_101_29
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31901..33559)
-----------------
DNA (1659bp)
protein (553aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
ATP-binding region ATPase domain protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E4X9_9MICO rbh
signal transduction histidine kinase rbh
scnpilot_solids2_trim150_scaffold_101_30
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33658..34599
-----------------
DNA (942bp)
protein (314aa)
Pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_00215, ECO:0000256|RuleBase:RU003530}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_00215, ECO:0000256|RuleBase:RU003530};; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_00215}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
coaA; panthothenate kinase; K00867 type I pantothenate kinase [EC:2.7.1.33] rbh
pantothenate kinase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003484B2C rbh
Displaying items 1-30 of 109 in total

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