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scnpilot_solids2_trim150_scaffold_221

Search features with annotation key words

Displaying items 31-60 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_221_31
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32306..34087)
-----------------
DNA (1782bp)
protein (594aa)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase {ECO:0000256|HAMAP-Rule:MF_01659, ECO:0000256|SAAS:SAAS00056887}; Short=SEPHCHC synthase {ECO:0000256|HAMAP-Rule:MF_01659};; EC=2.2.1.9 {ECO:0000256|HAMAP-Rule:MF_01659};; Menaquinone biosynthesis protein MenD {ECO:0000256|HAMAP-Rule:MF_01659}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; K02551 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9] rbh
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI00037DDAB6 rbh
scnpilot_solids2_trim150_scaffold_221_32
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34180..34521)
-----------------
DNA (342bp)
protein (114aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KEJ5_9MICO
Membrane protein {ECO:0000313|EMBL:KDA07026.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase
scnpilot_solids2_trim150_scaffold_221_33
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34614..34877
-----------------
DNA (264bp)
protein (88aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KEL1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL34515.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
small-conductance mechanosensitive channel
scnpilot_solids2_trim150_scaffold_221_34
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34902..35543)
-----------------
DNA (642bp)
protein (214aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002DC50E8 rbh
Contig_11, whole genome shotgun sequence {ECO:0000313|EMBL:KIP92955.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_221_35
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35606..36616)
-----------------
DNA (1011bp)
protein (337aa)
1,4-dihydroxy-2-naphthoate octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937}; Short=DHNA-octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937};; EC=2.5.1.74 {ECO:0000256|HAMAP-Rule:MF_01937};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase; K02548 1,4-dihydroxy-2-naphthoate octaprenyltransferase [EC:2.5.1.74 2.5.1.-] rbh
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E7F25A rbh
scnpilot_solids2_trim150_scaffold_221_36
Actinomyces johnsonii, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36862..37584
-----------------
DNA (723bp)
protein (241aa)
Pyridoxal phosphate enzyme, YggS family n=1 Tax=Actinomyces johnsonii F0542 RepID=U1S256_9ACTO rbh
Pyridoxal phosphate enzyme, YggS family {ECO:0000313|EMBL:ERH25983.1}; TaxID=1321818 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces johnsonii F0542.;"
alanine racemase, N-terminal domain protein
scnpilot_solids2_trim150_scaffold_221_37
Corynebacterium efficiens, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37581..38378
-----------------
DNA (798bp)
protein (266aa)
pyridoxal/pyridoxine/pyridoxamine kinase; K00868 pyridoxine kinase [EC:2.7.1.35]
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=196164 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM; 11189 / NBRC 100395).;"
Pyridoxal kinase n=2 Tax=Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395) RepID=C8NNC6_COREF
scnpilot_solids2_trim150_scaffold_221_38
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38385..38825)
-----------------
DNA (441bp)
protein (147aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003149769
Leucine-responsive regulatory protein {ECO:0000313|EMBL:KJL22406.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
transcriptional regulator; K03719 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
scnpilot_solids2_trim150_scaffold_221_39
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38898..40346
-----------------
DNA (1449bp)
protein (483aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034D57F1 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL25358.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_221_40
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

40496..41146
-----------------
DNA (651bp)
protein (217aa)
NADP-dependent 3-hydroxy acid dehydrogenase YdfG {ECO:0000313|EMBL:KJQ54006.1}; EC=1.1.1.- {ECO:0000313|EMBL:KJQ54006.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003467819
dehydrogenase with different specificities
scnpilot_solids2_trim150_scaffold_221_41
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(41112..41765)
-----------------
DNA (654bp)
protein (218aa)
hypothetical protein n=1 Tax=Arthrobacter sp. M2012083 RepID=UPI00035C8079
Uncharacterized protein {ECO:0000313|EMBL:KJL36997.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_221_42
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

41931..42998
-----------------
DNA (1068bp)
protein (356aa)
threonine aldolase; K01620 threonine aldolase [EC:4.1.2.5] rbh
threonine aldolase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034BF4FB rbh
Contig_11, whole genome shotgun sequence {ECO:0000313|EMBL:KIP92947.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
scnpilot_solids2_trim150_scaffold_221_43
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(43166..43753)
-----------------
DNA (588bp)
protein (196aa)
ADP-ribose pyrophosphatase n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003711C32 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL25362.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
SAM-dependent methyltransferase rbh
scnpilot_solids2_trim150_scaffold_221_44
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

43821..44474
-----------------
DNA (654bp)
protein (218aa)
Carboxylesterase 2 {ECO:0000313|EMBL:KJL20551.1}; EC=3.1.1.1 {ECO:0000313|EMBL:KJL20551.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00036D17C8 rbh
esterase; K06999 phospholipase/carboxylesterase
scnpilot_solids2_trim150_scaffold_221_45
unknown

Not on your lists

comp(44465..44701)
-----------------
DNA (237bp)
protein (79aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_221_46
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

45023..46687
-----------------
DNA (1665bp)
protein (555aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KBX5_9MICO rbh
Putative ABC transporter ATP-binding protein YheS {ECO:0000313|EMBL:KJL32417.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
ATPase components of ABC transporters with duplicated ATPase domains rbh
scnpilot_solids2_trim150_scaffold_221_47
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(46691..47101)
-----------------
DNA (411bp)
protein (137aa)
Uncharacterized protein n=1 Tax=Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM 6432 / NBRC 12425 / NCIMB 8070) RepID=K7S651_PROA4
Uncharacterized protein {ECO:0000313|EMBL:KJL20545.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_221_48
Arthrobacter sp. PAMC25486, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(47152..49776)
-----------------
DNA (2625bp)
protein (875aa)
Brp/Blh family beta-carotene 15,15'-monooxygenase n=1 Tax=Actinomyces sp. oral taxon 448 str. F0400 RepID=F9EEV6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:AIY02304.1}; TaxID=1494608 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. PAMC25486.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_221_49
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

49911..54518
-----------------
DNA (4608bp)
protein (1536aa)
Lhr-like helicase; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] rbh
DEAD/DEAH box helicase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000349401F rbh
Contig_11, whole genome shotgun sequence {ECO:0000313|EMBL:KIP92944.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
scnpilot_solids2_trim150_scaffold_221_50
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

54577..54825
-----------------
DNA (249bp)
protein (83aa)
antitoxin n=1 Tax=Arthrobacter sp. PAO19 RepID=UPI0003B4C21E
Antitoxin {ECO:0000313|EMBL:KJC63122.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
prevent-host-death family protein
scnpilot_solids2_trim150_scaffold_221_51
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

54822..55088
-----------------
DNA (267bp)
protein (89aa)
Toxin YoeB {ECO:0000313|EMBL:KJQ53997.1}; EC=3.1.-.- {ECO:0000313|EMBL:KJQ53997.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
toxin-antitoxin system, toxin component, Txe/YoeB family n=1 Tax=Arthrobacter sp. PAO19 RepID=UPI0003B655E7
hypothetical protein
scnpilot_solids2_trim150_scaffold_221_52
unknown

Not on your lists

55116..55436
-----------------
DNA (321bp)
protein (107aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_221_53
Gordonia amarae, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(55539..55997)
-----------------
DNA (459bp)
protein (153aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034C3782
Putative DNA-binding protein {ECO:0000313|EMBL:GAB05639.1}; TaxID=1075090 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia amarae NBRC 15530.;"
putative DNA-binding protein
scnpilot_solids2_trim150_scaffold_221_54
Gordonia amarae, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(56011..56724)
-----------------
DNA (714bp)
protein (238aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003488841 rbh
Putative uncharacterized protein {ECO:0000313|EMBL:GAB05640.1}; TaxID=1075090 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia amarae NBRC 15530.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_221_55
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

56816..57559
-----------------
DNA (744bp)
protein (248aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KBX9_9MICO
Protein CysZ {ECO:0000313|EMBL:KJL32412.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein; K06203 CysZ protein
scnpilot_solids2_trim150_scaffold_221_56
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

57552..58325
-----------------
DNA (774bp)
protein (258aa)
formamidopyrimidine-DNA glycosylase; K05522 endonuclease VIII [EC:3.2.2.- 4.2.99.18] rbh
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000348E92B rbh
DNA glycosylase {ECO:0000313|EMBL:EYT60105.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
scnpilot_solids2_trim150_scaffold_221_57
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

58418..58825
-----------------
DNA (408bp)
protein (136aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KEN0_9MICO
Transferase {ECO:0000313|EMBL:KDA07009.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
scnpilot_solids2_trim150_scaffold_221_58
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(58844..59275)
-----------------
DNA (432bp)
protein (144aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KTT9_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EQM83434.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_221_59
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(59459..59887)
-----------------
DNA (429bp)
protein (143aa)
PROBABLE TRANSMEMBRANE PROTEIN n=1 Tax=Rhodococcus sp. EsD8 RepID=N1MFV8_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:KJL32409.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
DoxX family protein
scnpilot_solids2_trim150_scaffold_221_60
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

59978..60658
-----------------
DNA (681bp)
protein (227aa)
Putative transcriptional regulator n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SM19_NOCSJ
Uncharacterized protein {ECO:0000313|EMBL:CCH77283.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
putative transcriptional regulator
Displaying items 31-60 of 70 in total

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