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scnpilot_solids2_trim150_scaffold_231

Search features with annotation key words

Displaying items 91-119 of 119 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_231_90
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

88126..89895
-----------------
DNA (1770bp)
protein (590aa)
Biotin carboxylase {ECO:0000313|EMBL:KJL20750.1}; EC=6.3.4.14 {ECO:0000313|EMBL:KJL20750.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
accC; acetyl/propionyl-CoA carboxylase, alpha subunit; K11263 acetyl-/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.3.4.14] rbh
Acetyl-CoA carboxylase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KIX3_9MICO rbh
scnpilot_solids2_trim150_scaffold_231_91
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(89997..91475)
-----------------
DNA (1479bp)
protein (493aa)
lpdA; pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] rbh
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KNW2_9MICO rbh
Flavoprotein disulfide reductase {ECO:0000313|EMBL:KDA06056.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
scnpilot_solids2_trim150_scaffold_231_92
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

91491..92324
-----------------
DNA (834bp)
protein (278aa)
deoD; purine nucleoside phosphorylase; K03783 purine-nucleoside phosphorylase [EC:2.4.2.1]
purine nucleoside phosphorylase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034B9E79
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids2_trim150_scaffold_231_93
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

92321..94006
-----------------
DNA (1686bp)
protein (562aa)
cpsG; phosphomannomutase; K01840 phosphomannomutase [EC:5.4.2.8] rbh
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KJR1_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EQM78245.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
scnpilot_solids2_trim150_scaffold_231_94
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

94009..94266
-----------------
DNA (258bp)
protein (86aa)
Phosphocarrier protein HPr {ECO:0000313|EMBL:KJL28957.1}; EC=2.7.11.- {ECO:0000313|EMBL:KJL28957.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K930_9MICO
scnpilot_solids2_trim150_scaffold_231_95
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(94273..96189)
-----------------
DNA (1917bp)
protein (639aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KIX9_9MICO rbh
Putative licABCH operon regulator {ECO:0000313|EMBL:KJL23834.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
transcriptional antiterminator; K03491 lichenan operon transcriptional antiterminator rbh
scnpilot_solids2_trim150_scaffold_231_96
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

96342..96659
-----------------
DNA (318bp)
protein (106aa)
phosphotransferase system cellobiose-specific component IIB; K02760 PTS system, cellobiose-specific IIB component [EC:2.7.1.69]
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000377CDE5
PTS system, Lactose/Cellobiose specific IIB subunit {ECO:0000313|EMBL:KJL23835.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
scnpilot_solids2_trim150_scaffold_231_97
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

96656..96934
-----------------
DNA (279bp)
protein (93aa)
Phosphocarrier protein HPr {ECO:0000313|EMBL:KJL20743.1}; EC=2.7.11.- {ECO:0000313|EMBL:KJL20743.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
phosphotransferase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034DA6F8
phosphotransferase system, HPr-related protein; K11189 phosphocarrier protein
scnpilot_solids2_trim150_scaffold_231_98
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

96931..98586
-----------------
DNA (1656bp)
protein (552aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
ptsI; phosphoenolpyruvate-protein kinase; K08483 phosphotransferase system, enzyme I, PtsI [EC:2.7.3.9] rbh
phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000347D6D2 rbh
scnpilot_solids2_trim150_scaffold_231_99
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

98626..100704
-----------------
DNA (2079bp)
protein (693aa)
phosphotransferase system, mannitol-specific IIBC component; K02798 PTS system, mannitol-specific IIA component [EC:2.7.1.69]; K02799 PTS system, mannitol-specific IIB component [EC:2.7.1.69]; K02800 PTS system, mannitol-specific IIC component rbh
PTS mannitol transporter subunit IIB n=1 Tax=Microbacterium barkeri RepID=UPI0002D38332 rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids2_trim150_scaffold_231_100
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

100701..101861
-----------------
DNA (1161bp)
protein (387aa)
Mannitol-1-phosphate 5-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00196, ECO:0000256|SAAS:SAAS00015323}; EC=1.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00196, ECO:0000256|SAAS:SAAS00015317};; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
mtlD; mannitol-1-phosphate/altronate dehydrogenase; K00009 mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17] rbh
mannitol-1-phosphate 5-dehydrogenase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000367E7E3 rbh
scnpilot_solids2_trim150_scaffold_231_101
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

101923..102642
-----------------
DNA (720bp)
protein (240aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035FE8E5
Uncharacterized protein {ECO:0000313|EMBL:EKM98374.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
hypothetical protein; K07090
scnpilot_solids2_trim150_scaffold_231_102
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(102651..103514)
-----------------
DNA (864bp)
protein (288aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034DBE76 rbh
Contig_1, whole genome shotgun sequence {ECO:0000313|EMBL:KIP95802.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
PfkB domain-containing protein
scnpilot_solids2_trim150_scaffold_231_103
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(103522..104637)
-----------------
DNA (1116bp)
protein (372aa)
Aminodeoxyfutalosine deaminase {ECO:0000313|EMBL:KJL28946.1}; EC=3.5.4.- {ECO:0000313|EMBL:KJL28946.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
add; adenosine deaminase; K01488 adenosine deaminase [EC:3.5.4.4] rbh
adenosine deaminase n=1 Tax=Microbacterium barkeri RepID=UPI0002E1C748 rbh
scnpilot_solids2_trim150_scaffold_231_104
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(104667..105959)
-----------------
DNA (1293bp)
protein (431aa)
deoA; thymidine phosphorylase; K00758 thymidine phosphorylase [EC:2.4.2.4] rbh
Pyrimidine-nucleoside phosphorylase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KLY8_9MICO rbh
Pyrimidine-nucleoside phosphorylase {ECO:0000313|EMBL:EQM78259.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
scnpilot_solids2_trim150_scaffold_231_105
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(105956..106354)
-----------------
DNA (399bp)
protein (133aa)
Cytidine deaminase {ECO:0000313|EMBL:KJL23847.1}; EC=3.5.4.5 {ECO:0000313|EMBL:KJL23847.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
cytidine deaminase; K01489 cytidine deaminase [EC:3.5.4.5]
Cytidine deaminase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KJS2_9MICO
scnpilot_solids2_trim150_scaffold_231_106
Isoptericola variabilis, Isoptericola, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(106397..107671)
-----------------
DNA (1275bp)
protein (425aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Isoptericola variabilis (strain 225) RepID=F6FPW2_ISOV2 rbh
ABC transporter; K02057 simple sugar transport system permease protein rbh
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEG43751.1}; TaxID=743718 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Isoptericola.;" source="Isoptericola variabilis (strain 225).;"
scnpilot_solids2_trim150_scaffold_231_107
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(107668..108930)
-----------------
DNA (1263bp)
protein (421aa)
ABC transporter permease n=1 Tax=Microbacterium sp. B19 RepID=UPI0003486CEE rbh
ABC transporter permease {ECO:0000313|EMBL:KDA06043.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
ABC transporter permease; K02057 simple sugar transport system permease protein rbh
scnpilot_solids2_trim150_scaffold_231_108
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(108927..110441)
-----------------
DNA (1515bp)
protein (505aa)
ABC transporter ATPase; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17] rbh
ABC-type uncharacterized transport systems, ATPase components n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NCD7_MICTS rbh
Heme ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEP76115.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
scnpilot_solids2_trim150_scaffold_231_109
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(110541..111638)
-----------------
DNA (1098bp)
protein (366aa)
Basic membrane lipoprotein n=1 Tax=Isoptericola variabilis (strain 225) RepID=F6FPV9_ISOV2 rbh
Membrane protein {ECO:0000313|EMBL:KDA06042.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
basic membrane lipoprotein; K07335 basic membrane protein A and related proteins rbh
scnpilot_solids2_trim150_scaffold_231_110
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(111744..112856)
-----------------
DNA (1113bp)
protein (371aa)
Mannose-1-phosphate guanylyltransferase RfbM {ECO:0000313|EMBL:KJL28939.1}; EC=2.7.7.13 {ECO:0000313|EMBL:KJL28939.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
manC; mannose-1-phosphate guanylyltransferase; K00971 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] rbh
mannose-1-phosphate guanylyltransferase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034CAF86 rbh
scnpilot_solids2_trim150_scaffold_231_111
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

113013..113438
-----------------
DNA (426bp)
protein (142aa)
Succinate dehydrogenase/fumarate reductase, cytochrome b subunit n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NCE0_MICTS
Succinate dehydrogenase/Fumarate reductase transmembrane subunit {ECO:0000313|EMBL:KJQ54539.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
succinate dehydrogenase/fumarate reductase, cytochrome b subunit; K00241 succinate dehydrogenase cytochrome b556 subunit
scnpilot_solids2_trim150_scaffold_231_112
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

113438..113890
-----------------
DNA (453bp)
protein (151aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003161C07
Contig_17, whole genome shotgun sequence {ECO:0000313|EMBL:KIP91493.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
sdhD; succinate dehydrogenase, hydrophobic anchor subunit; K00242 succinate dehydrogenase membrane anchor subunit
scnpilot_solids2_trim150_scaffold_231_113
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

113916..115742
-----------------
DNA (1827bp)
protein (609aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
sdhA; succinate dehydrogenase/fumarate reductase, flavoprotein subunit; K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] rbh
succinate dehydrogenase n=1 Tax=Microbacterium barkeri RepID=UPI00031CD178 rbh
scnpilot_solids2_trim150_scaffold_231_114
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

115745..116506
-----------------
DNA (762bp)
protein (254aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
sdhB; succinate dehydrogenase/fumarate reductase, Fe-S protein subunit; K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1] rbh
succinate dehydrogenase n=1 Tax=Microbacterium barkeri RepID=UPI0002D3727C rbh
scnpilot_solids2_trim150_scaffold_231_115
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

116527..117645
-----------------
DNA (1119bp)
protein (373aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2XS45_9MICO rbh
Inner membrane protein YhjD {ECO:0000313|EMBL:KJL20720.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein; K07058 membrane protein rbh
scnpilot_solids2_trim150_scaffold_231_116
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

117655..118548
-----------------
DNA (894bp)
protein (298aa)
Exodeoxyribonuclease {ECO:0000313|EMBL:KJL34673.1}; EC=3.1.11.2 {ECO:0000313|EMBL:KJL34673.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
exonuclease III; K01142 exodeoxyribonuclease III [EC:3.1.11.2] rbh
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K952_9MICO rbh
scnpilot_solids2_trim150_scaffold_231_117
unknown

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118688..118849
-----------------
DNA (162bp)
protein (54aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_231_118
unknown

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comp(118831..118911)
-----------------
DNA (81bp)
protein (27aa)

This feature has no annotations

Displaying items 91-119 of 119 in total

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