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scnpilot_solids2_trim150_scaffold_244

Search features with annotation key words

Displaying items 31-60 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_244_31
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28828..29430)
DNA (603bp) protein (201aa)
sugar kinase, ribokinase family; K00874 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
2-dehydro-3-deoxyphosphogluconate aldolase n=1 Tax=Humibacter albus RepID=UPI0003B3D9AC rbh
2-dehydro-3-deoxyphosphogluconate aldolase {ECO:0000313|EMBL:KHK95668.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
scnpilot_solids2_trim150_scaffold_244_32
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29444..30361)
DNA (918bp) protein (306aa)
sugar kinase, ribokinase family; K00874 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
carbohydrate kinase n=1 Tax=Agromyces subbeticus RepID=UPI0003B5EB14 rbh
Carbohydrate kinase {ECO:0000313|EMBL:KHK95689.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
scnpilot_solids2_trim150_scaffold_244_33
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30430..31683
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K5N9_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:KHK95667.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
D-amino acid deaminase rbh
scnpilot_solids2_trim150_scaffold_244_34
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31698..33425
DNA (1728bp) protein (576aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KFE6_9MICO rbh
N-acyl-D-aspartate/D-glutamate deacylase {ECO:0000313|EMBL:KHK95688.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
N-acyl-D-aspartate/D-glutamate deacylase rbh
scnpilot_solids2_trim150_scaffold_244_35
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33429..34160
DNA (732bp) protein (244aa)
ArsR family transcriptional regulator n=1 Tax=Humibacter albus RepID=UPI0003B38C64 rbh
IclR family transcriptional regulator {ECO:0000313|EMBL:KIH96459.1}; TaxID=183763 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora alba.;"
bacterial transcriptional regulator family protein
scnpilot_solids2_trim150_scaffold_244_36
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34157..34576
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KKE7_9MICO
Endoribonuclease L-PSP {ECO:0000313|EMBL:KHK95666.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
endoribonuclease L-PSP; K07567 TdcF protein
scnpilot_solids2_trim150_scaffold_244_37
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34625..35557)
DNA (933bp) protein (311aa)
Glucose--fructose oxidoreductase {ECO:0000313|EMBL:KJL21912.1}; EC=1.1.99.28 {ECO:0000313|EMBL:KJL21912.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003741AA2 rbh
NADH-dependent dehydrogenase
scnpilot_solids2_trim150_scaffold_244_38
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35727..36467)
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002EDF1C8 rbh
Uncharacterized protein {ECO:0000313|EMBL:KDA04758.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_244_39
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36607..38790
DNA (2184bp) protein (728aa)
membrane protein n=1 Tax=Leucobacter chromiiresistens RepID=UPI000262A983 rbh
Membrane protein YdfJ {ECO:0000313|EMBL:KJL34230.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein; K06994 putative drug exporter of the RND superfamily rbh
scnpilot_solids2_trim150_scaffold_244_40
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38815..40137
DNA (1323bp) protein (441aa)
Sensor histidine kinase LiaS {ECO:0000313|EMBL:KJL21281.1}; EC=2.7.13.3 {ECO:0000313|EMBL:KJL21281.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
signal transduction histidine kinase (EC:2.7.13.3) rbh
histidine kinase n=1 Tax=Leucobacter chromiiresistens RepID=UPI000262A982 rbh
scnpilot_solids2_trim150_scaffold_244_41
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

40134..40751
DNA (618bp) protein (206aa)
Two-component system response regulator n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UTC2_9ACTO rbh
Response regulator protein VraR {ECO:0000313|EMBL:KJL21282.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
two-component system response regulator
scnpilot_solids2_trim150_scaffold_244_42
Gordonia sihwensis, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

40772..42397
DNA (1626bp) protein (542aa)
multidrug transporter n=1 Tax=Nocardiopsis halophila RepID=UPI00034C657D rbh
Putative drug resistance transporter {ECO:0000313|EMBL:GAC59184.1}; TaxID=1223544 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia sihwensis NBRC 108236.;"
drug resistance efflux protein rbh
scnpilot_solids2_trim150_scaffold_244_43
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(42470..43222)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KKG0_9MICO
GDSL-like Lipase/Acylhydrolase {ECO:0000313|EMBL:KJL33746.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_244_44
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(43204..43740)
DNA (537bp) protein (179aa)
Thermoresistant gluconokinase {ECO:0000313|EMBL:KJQ55656.1}; EC=2.7.1.12 {ECO:0000313|EMBL:KJQ55656.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
carbohydrate kinase (EC:2.7.1.12); K00851 gluconokinase [EC:2.7.1.12]
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KKF3_9MICO
scnpilot_solids2_trim150_scaffold_244_45
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(43737..44975)
DNA (1239bp) protein (413aa)
Bifunctional D-altronate/D-mannonate dehydratase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KAE6_9MICO rbh
Starvation-sensing protein RspA {ECO:0000313|EMBL:KJL34773.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
bifunctional D-altronate/D-mannonate dehydratase; K08323 starvation sensing protein RspA rbh
scnpilot_solids2_trim150_scaffold_244_46
Arthrobacter chlorophenolicus, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(45025..46488)
DNA (1464bp) protein (488aa)
Sugar (Glycoside-Pentoside-Hexuronide) transporter n=1 Tax=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) RepID=B8HCK1_ARTCA rbh
glucuronide transporter; K03292 glycoside/pentoside/hexuronide:cation symporter, GPH family rbh
Sugar (Glycoside-Pentoside-Hexuronide) transporter {ECO:0000313|EMBL:ACL38784.1}; TaxID=452863 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter chlorophenolicus (strain ATCC 700700 / DSM 12829 / JCM; 12360 / NCIMB 13794 / A6).;"
scnpilot_solids2_trim150_scaffold_244_47
Arthrobacter phenanthrenivorans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

46734..47594
DNA (861bp) protein (287aa)
Sugar phosphate isomerase/epimerase n=1 Tax=Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG 23796 / Sphe3) RepID=F0MBK8_ARTPP rbh
sugar phosphate isomerase/epimerase rbh
Sugar phosphate isomerase/epimerase {ECO:0000313|EMBL:ADX71890.1}; TaxID=930171 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG; 23796 / Sphe3).;"
scnpilot_solids2_trim150_scaffold_244_48
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

47649..48569
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036EAC50 rbh
Contig_4, whole genome shotgun sequence {ECO:0000313|EMBL:KIP94936.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
permease; K07088 rbh
scnpilot_solids2_trim150_scaffold_244_49
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(48618..49652)
DNA (1035bp) protein (345aa)
LacI family transcription regulator n=1 Tax=Humibacter albus RepID=UPI0003B664D3 rbh
HTH-type transcriptional regulator GalS {ECO:0000313|EMBL:KJL34774.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
transcriptional regulator; K02529 LacI family transcriptional regulator rbh
scnpilot_solids2_trim150_scaffold_244_50
Arthrobacter sp. SPG23, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(49733..50605)
DNA (873bp) protein (291aa)
peptide ABC transporter ATPase n=1 Tax=Arthrobacter sp. 131MFCol6.1 RepID=UPI000370F477 rbh
SPG23_c4, whole genome shotgun sequence {ECO:0000313|EMBL:KIS28958.1}; TaxID=1610703 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. SPG23.;"
ATPase component of various ABC-type transporters with duplicated ATPase domain; K02032 peptide/nickel transport system ATP-binding protein rbh
scnpilot_solids2_trim150_scaffold_244_51
Arthrobacter chlorophenolicus, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(50608..52389)
DNA (1782bp) protein (594aa)
ABC transporter related n=1 Tax=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) RepID=B8HC67_ARTCA rbh
peptide ABC transporter inner membrane protein rbh
ABC transporter related {ECO:0000313|EMBL:ACL38777.1}; TaxID=452863 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter chlorophenolicus (strain ATCC 700700 / DSM 12829 / JCM; 12360 / NCIMB 13794 / A6).;"
scnpilot_solids2_trim150_scaffold_244_52
Arthrobacter chlorophenolicus, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(52386..53327)
DNA (942bp) protein (314aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) RepID=B8HC66_ARTCA rbh
binding-protein-dependent transporters inner membrane component; K02033 peptide/nickel transport system permease protein rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACL38776.1}; Flags: Precursor;; TaxID=452863 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter chlorophenolicus (strain ATCC 700700 / DSM 12829 / JCM; 12360 / NCIMB 13794 / A6).;"
scnpilot_solids2_trim150_scaffold_244_53
Arthrobacter sp. SPG23, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(53393..54925)
DNA (1533bp) protein (511aa)
ABC-type dipeptide transport system, periplasmic component n=1 Tax=Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG 23796 / Sphe3) RepID=F0MBK4_ARTPP rbh
SPG23_c4, whole genome shotgun sequence {ECO:0000313|EMBL:KIS28956.1}; TaxID=1610703 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. SPG23.;"
ABC-type dipeptide transporter periplasmic protein rbh
scnpilot_solids2_trim150_scaffold_244_54
Arthrobacter phenanthrenivorans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(55147..56313)
DNA (1167bp) protein (389aa)
dehydrogenase n=1 Tax=Aestuariimicrobium kwangyangense RepID=UPI0003B66CA2 rbh
dehydrogenase rbh
Putative dehydrogenase {ECO:0000313|EMBL:ADX71891.1}; TaxID=930171 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG; 23796 / Sphe3).;"
scnpilot_solids2_trim150_scaffold_244_55
Arthrobacter phenanthrenivorans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(56316..57329)
DNA (1014bp) protein (338aa)
Putative dehydrogenase n=1 Tax=Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG 23796 / Sphe3) RepID=F0MBK3_ARTPP rbh
dehydrogenase rbh
Putative dehydrogenase {ECO:0000313|EMBL:ADX71885.1}; TaxID=930171 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG; 23796 / Sphe3).;"
scnpilot_solids2_trim150_scaffold_244_56
Arthrobacter phenanthrenivorans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(57326..58177)
DNA (852bp) protein (284aa)
xylose isomerase n=1 Tax=Humibacter albus RepID=UPI0003B56D69 rbh
Xylose isomerase {ECO:0000313|EMBL:KIC62860.1}; TaxID=361575 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter phenanthrenivorans.;"
xylose isomerase domain-containing protein rbh
scnpilot_solids2_trim150_scaffold_244_57
Arthrobacter phenanthrenivorans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

58408..60147
DNA (1740bp) protein (580aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=930171 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG; 23796 / Sphe3).;"
Carbohydrate kinase, thermoresistant glucokinase family n=1 Tax=Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG 23796 / Sphe3) RepID=F0MBL5_ARTPP rbh
thermoresistant glucokinase family carbohydrate kinase rbh
scnpilot_solids2_trim150_scaffold_244_58
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

60198..61610
DNA (1413bp) protein (471aa)
Uronate isomerase {ECO:0000256|SAAS:SAAS00013440}; EC=5.3.1.12 {ECO:0000256|SAAS:SAAS00013438};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
glucuronate isomerase; K01812 glucuronate isomerase [EC:5.3.1.12] rbh
glucuronate isomerase n=1 Tax=Humibacter albus RepID=UPI0003B51491 rbh
scnpilot_solids2_trim150_scaffold_244_59
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

61607..62974
DNA (1368bp) protein (456aa)
Polyol:NADP oxidoreductase {ECO:0000313|EMBL:KJL34776.1}; EC=1.1.1.- {ECO:0000313|EMBL:KJL34776.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
mannitol dehydrogenase; K00040 fructuronate reductase [EC:1.1.1.57] rbh
oxidoreductase n=1 Tax=Humibacter albus RepID=UPI0003B3CF70 rbh
scnpilot_solids2_trim150_scaffold_244_60
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

62971..63108
DNA (138bp) protein (46aa)
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000256|PIRNR:PIRNR000109}; EC=1.1.1.44 {ECO:0000256|PIRNR:PIRNR000109};; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
6-phosphogluconate dehydrogenase n=1 Tax=Microbacterium yannicii RepID=UPI000313675E
6-phosphogluconate dehydrogenase
Displaying items 31-60 of 60 in total

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