ggKbase home page

scnpilot_solids2_trim150_scaffold_244

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_244_1
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..91)
DNA (90bp) protein (30aa)
hypothetical protein n=1 Tax=Microbacterium RepID=UPI0003765A9D
Uncharacterized protein {ECO:0000313|EMBL:KJQ53331.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
scnpilot_solids2_trim150_scaffold_244_2
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(278..976)
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034870ED rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL32014.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_244_3
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1100..2386
DNA (1287bp) protein (429aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
purA; adenylosuccinate synthase; K01939 adenylosuccinate synthase [EC:6.3.4.4] rbh
adenylosuccinate synthetase n=1 Tax=Microbacterium barkeri RepID=UPI00037AA3F9 rbh
scnpilot_solids2_trim150_scaffold_244_4
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

2517..3692
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034C6F9A rbh
3-carboxymuconate cyclase rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids2_trim150_scaffold_244_5
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4043..5440
DNA (1398bp) protein (466aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003176BED rbh
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:KDA05193.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
pyridine nucleotide-disulfide oxidoreductase dimerization subunit rbh
scnpilot_solids2_trim150_scaffold_244_6
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5517..5819
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KI81_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL30343.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_244_7
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5826..6767
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002FE68AB
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KDA05195.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
glycine/betaine ABC transporter ATPase; K05847 osmoprotectant transport system ATP-binding protein
scnpilot_solids2_trim150_scaffold_244_8
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6769..7440
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K5J4_9MICO rbh
ABC transporter permease {ECO:0000313|EMBL:KDA05196.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
glycine/betaine ABC transporter permease; K05846 osmoprotectant transport system permease protein
scnpilot_solids2_trim150_scaffold_244_9
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7437..8162
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KFA1_9MICO rbh
Glycine betaine/carnitine/choline transport system permease protein OpuCB {ECO:0000313|EMBL:KJQ52427.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
osmoprotectant (glycine betaine/carnitine/choline/L-proline) ABC transporter inner membrane subunit; K05846 osmoprotectant transport system permease protein rbh
scnpilot_solids2_trim150_scaffold_244_10
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8186..9103
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KKA3_9MICO rbh
Glycine betaine/carnitine/choline-binding protein OpuCC {ECO:0000313|EMBL:KJL25219.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
periplasmic glycine betaine/choline-binding (LipO)protein of an ABC transporter; K05845 osmoprotectant transport system substrate-binding protein rbh
scnpilot_solids2_trim150_scaffold_244_11
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9126..10316)
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KI86_9MICO rbh
Pheromone autoinducer 2 transporter {ECO:0000313|EMBL:KJL32031.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
permease rbh
scnpilot_solids2_trim150_scaffold_244_12
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10457..10753
DNA (297bp) protein (99aa)
Chorismate mutase {ECO:0000313|EMBL:EYT60763.1}; EC=5.4.99.5 {ECO:0000313|EMBL:EYT60763.1};; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
chorismate mutase; K04092 chorismate mutase [EC:5.4.99.5]
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034B242A
scnpilot_solids2_trim150_scaffold_244_13
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10979..11878
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000347A977 rbh
Contig_29, whole genome shotgun sequence {ECO:0000313|EMBL:KIP89594.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_244_14
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11906..12889
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K5K3_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EQM75704.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
sugar kinase rbh
scnpilot_solids2_trim150_scaffold_244_15
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13008..14444
DNA (1437bp) protein (479aa)
Tagatose-6-phosphate kinase {ECO:0000313|EMBL:KJL32041.1}; EC=2.7.1.144 {ECO:0000313|EMBL:KJL32041.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002FF066A
fructose/tagatose bisphosphate aldolase
scnpilot_solids2_trim150_scaffold_244_16
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14441..15316
DNA (876bp) protein (292aa)
Putative fructose-bisphosphate aldolase {ECO:0000313|EMBL:KJL32042.1}; EC=4.1.2.13 {ECO:0000313|EMBL:KJL32042.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
fructose/tagatose bisphosphate aldolase; K01624 fructose-bisphosphate aldolase, class II [EC:4.1.2.13] rbh
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KKB0_9MICO rbh
scnpilot_solids2_trim150_scaffold_244_17
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15313..16089
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034AA171 rbh
Glycerol-3-phosphate regulon repressor {ECO:0000313|EMBL:KJL32043.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
DeoR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_244_18
Kocuria palustris, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16225..16725)
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Citricoccus sp. CH26A RepID=UPI000255EF79
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:EME36918.1}; TaxID=1236550 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria palustris PEL.;"
AsnC family transcriptional regulator
scnpilot_solids2_trim150_scaffold_244_19
Kocuria palustris, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16876..18099
DNA (1224bp) protein (408aa)
D-amino acid dehydrogenase small subunit n=1 Tax=Kocuria palustris PEL RepID=M2YEB2_9MICC rbh
D-amino acid dehydrogenase small subunit {ECO:0000313|EMBL:EME36919.1}; TaxID=1236550 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria palustris PEL.;"
D-amino acid dehydrogenase (deaminating) rbh
scnpilot_solids2_trim150_scaffold_244_20
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18258..19586)
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KG48_9MICO rbh
Enterobactin exporter EntS {ECO:0000313|EMBL:KJQ56084.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
transporter, major facilitator family protein
scnpilot_solids2_trim150_scaffold_244_21
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19660..20274
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E593B6
Helix-turn-helix domain protein {ECO:0000313|EMBL:KJQ56085.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
ArsR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_244_22
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20296..20757)
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036D63F5
Uncharacterized protein {ECO:0000313|EMBL:KJL33711.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
Activator of Hsp90 ATPase 1 family protein
scnpilot_solids2_trim150_scaffold_244_23
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20849..21097
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037A8972
Transcriptional repressor SdpR {ECO:0000313|EMBL:KJL33712.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
ArsR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_244_24
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21147..22439
DNA (1293bp) protein (431aa)
Ribosomal RNA large subunit methyltransferase G {ECO:0000313|EMBL:KJL24521.1}; EC=2.1.1.174 {ECO:0000313|EMBL:KJL24521.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
putative methyltransferase; K00564 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KIB4_9MICO rbh
scnpilot_solids2_trim150_scaffold_244_25
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22766..24028
DNA (1263bp) protein (421aa)
Glycine betaine/carnitine transport ATP-binding protein GbuA {ECO:0000313|EMBL:KJL32059.1}; EC=3.6.3.32 {ECO:0000313|EMBL:KJL32059.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
glycine/betaine ABC transporter ATPase; K02000 glycine betaine/proline transport system ATP-binding protein [EC:3.6.3.32] rbh
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034CB9E3 rbh
scnpilot_solids2_trim150_scaffold_244_26
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

24028..24978
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K5M0_9MICO rbh
proW; glycine/betaine ABC transporter permease; K02001 glycine betaine/proline transport system permease protein rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids2_trim150_scaffold_244_27
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25037..25951
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034CD31B rbh
Glycine betaine-binding protein OpuAC {ECO:0000313|EMBL:KJL24518.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
glycine/betaine ABC transporter systems periplasmic protein; K02002 glycine betaine/proline transport system substrate-binding protein rbh
scnpilot_solids2_trim150_scaffold_244_28
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26066..26473)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KFE2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EQM75740.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
rhodanese
scnpilot_solids2_trim150_scaffold_244_29
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26473..27192)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KID5_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EQM75742.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
YheO domain-containing protein
scnpilot_solids2_trim150_scaffold_244_30
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27321..28664
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KG79_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:KHK95669.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
general substrate transporter
Displaying items 1-30 of 60 in total

View Taxonomy