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scnpilot_solids2_trim150_scaffold_50_45

Organism: SCNPILOT_SOLID2_TRIM150_Microbacterium_69_27

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: comp(36751..37404)

Top 3 Functional Annotations

Value Algorithm Source
Predicted transmembrane transcriptional regulator n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NBC8_MICTS similarity UNIREF
DB: UNIREF100
  • Identity: 46.8
  • Coverage: 235.0
  • Bit_score: 181
  • Evalue 1.10e-42
Anti-sigma-L factor RslA {ECO:0000313|EMBL:KJL20810.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.4
  • Coverage: 220.0
  • Bit_score: 206
  • Evalue 3.60e-50
transmembrane transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 46.8
  • Coverage: 235.0
  • Bit_score: 181
  • Evalue 3.60e-43

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Taxonomy

Microbacterium azadirachtae → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 654
GTGAACACCGAGCACGAGAAGTACGCCGACTGGGACGCCGCCTACGCGCTGGGGGCGCTGTCTGCAACGGAGCGGGCGGAGTTCGAGGGGCACCTGGCCGAGTGCGAGCGCTGCCGGGTGGCCGTGGCGGAGCTGACCTCGACCGTCGCGGCGCTGGCACGGGTCAGTGCGGAGGATGCGCAGCGCATCGCGGATCAGGATGCCGACGGCGCGGCGCCTGTGCGGGTGCTGGCGGCCGCGCGCGCTCGCCGCCGCACGCGCAGGAGGGCCGCGTCCTGGATCGTCGGCGCGGCGGCTGCCGTTGTCGTGGCCACCGTGATCTCGGTCGCCCTGCTGATGCCGCGTGCGCCTGAGGCGGTCGCTCTGCAGCCGGTCGGGGGAGCGTCGGTCGTGGCGACCGTGGCGCTGACCAGCGTGCCGTGGGGCACCAAGCTCGACGTGGTCTGCGCCTACGAGGGCCACGCGGGTTGGAACGGCATGTACGAGCTGGCGGTCACCGCCGCCGACGGCACCACCACGACGCTCTCGAACTGGCGGGTCGAGGCCGGCGCGACCGCGCGGCTGTCCGCCGGCACGGGTCTCTCGGAGGCCGACATCCGCTCGGTCGAGATCAGGGATGCCTCCGGAGATGTCGTCGTGAAGCACGAGTTCTGA
PROTEIN sequence
Length: 218
VNTEHEKYADWDAAYALGALSATERAEFEGHLAECERCRVAVAELTSTVAALARVSAEDAQRIADQDADGAAPVRVLAAARARRRTRRRAASWIVGAAAAVVVATVISVALLMPRAPEAVALQPVGGASVVATVALTSVPWGTKLDVVCAYEGHAGWNGMYELAVTAADGTTTTLSNWRVEAGATARLSAGTGLSEADIRSVEIRDASGDVVVKHEF*