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scnpilot_solids2_trim150_scaffold_220

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_220_1
unknown

Not on your lists

comp(148..330)
DNA (183bp) protein (61aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_220_2
Chryseobacterium oranimense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(546..950)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VU10_9FLAO
VanZ like family protein {ECO:0000313|EMBL:CEJ68606.1}; TaxID=1300143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium oranimense G311.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_220_3
Chryseobacterium sp. P1-3, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(892..1269)
DNA (378bp) protein (126aa)
Glycine cleavage system H protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VU11_9FLAO
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=1517683 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. P1-3.;"
glycine cleavage system H protein; K02437 glycine cleavage system H protein
scnpilot_solids2_trim150_scaffold_220_4
Bergeyella zoohelcum, Bergeyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1381..8418)
DNA (7038bp) protein (2346aa)
Uncharacterized protein n=1 Tax=Bergeyella zoohelcum ATCC 43767 RepID=K1LMP9_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:EKB55996.1}; TaxID=883096 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bergeyella.;" source="Bergeyella zoohelcum ATCC 43767.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_220_5
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8427..9011)
DNA (585bp) protein (195aa)
Holliday junction DNA helicase RuvA; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12]
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
Holliday junction DNA helicase RuvA n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X0H6_FLAB3
scnpilot_solids2_trim150_scaffold_220_6
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9156..10880)
DNA (1725bp) protein (575aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X417_FLAB3 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU07155.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
scnpilot_solids2_trim150_scaffold_220_7
Chryseobacterium oranimense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10877..11371)
DNA (495bp) protein (165aa)
Fe2+/Zn2+ uptake regulation protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CMR7_9FLAO
Ferric uptake regulation protein {ECO:0000313|EMBL:CEJ71113.1}; TaxID=1300143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium oranimense G311.;"
Ferric uptake regulation protein FUR; K03711 Fur family transcriptional regulator, ferric uptake regulator
scnpilot_solids2_trim150_scaffold_220_8
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11555..13525)
DNA (1971bp) protein (657aa)
Kup system potassium uptake protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X415_FLAB3 rbh
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
Kup system potassium uptake protein; K03549 KUP system potassium uptake protein rbh
scnpilot_solids2_trim150_scaffold_220_9
unknown

Not on your lists

comp(13564..13656)
DNA (93bp) protein (31aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_220_10
Chryseobacterium sp. StRB126, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13672..14823)
DNA (1152bp) protein (384aa)
Transketolase, pyridine binding domain protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W425_9FLAO rbh
Pyruvate dehydrogenase {ECO:0000313|EMBL:BAP33132.1}; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. StRB126.;"
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type subunit beta rbh
scnpilot_solids2_trim150_scaffold_220_11
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14840..15262)
DNA (423bp) protein (141aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X413_FLAB3
hypothetical protein
Signal peptide protein {ECO:0000313|EMBL:KIA87930.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
scnpilot_solids2_trim150_scaffold_220_12
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15374..17302)
DNA (1929bp) protein (643aa)
Phosphoglycerol transferase family protein, alkaline phosphatase superfamily n=1 Tax=Chryseobacterium sp. CF314 RepID=J2K3R1_9FLAO rbh
Sulfatase {ECO:0000313|EMBL:KFF13286.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_220_13
Bergeyella zoohelcum, Bergeyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17395..18108
DNA (714bp) protein (238aa)
CDP-diacylglycerol--serine O-phosphatidyltransferase (EC:2.7.8.8); K00998 phosphatidylserine synthase [EC:2.7.8.8] rbh
CDP-diacylglycerol-serine O-phosphatidyltransferase n=1 Tax=Bergeyella zoohelcum CCUG 30536 RepID=K1LNM6_9FLAO rbh
CDP-diacylglycerol-serine O-phosphatidyltransferase {ECO:0000313|EMBL:EKB58525.1}; TaxID=883098 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bergeyella.;" source="Bergeyella zoohelcum CCUG 30536.;"
scnpilot_solids2_trim150_scaffold_220_14
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18146..18910
DNA (765bp) protein (255aa)
DNA Pol III Epsilon Chain; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7] rbh
DNA Pol III Epsilon Chain n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X410_FLAB3 rbh
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:KIA87933.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
scnpilot_solids2_trim150_scaffold_220_15
Polaribacter sp. MED152, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18979..22236)
DNA (3258bp) protein (1086aa)
hypothetical protein n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B33F02 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EAQ41962.1}; TaxID=313598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. MED152.;"
scnpilot_solids2_trim150_scaffold_220_16
unknown

Not on your lists

comp(22425..22529)
DNA (105bp) protein (35aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_220_17
unknown

Not on your lists

comp(22526..22645)
DNA (120bp) protein (40aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_220_18
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22743..23072
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. CF136 RepID=J3C4F6_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:CDS91526.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_220_19
Riemerella anatipestifer, Riemerella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23166..23798
DNA (633bp) protein (211aa)
Uncharacterized protein n=2 Tax=Riemerella anatipestifer RepID=J9R181_RIEAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFR36715.1}; TaxID=1228997 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella.;" source="Riemerella anatipestifer RA-CH-1.;"
scnpilot_solids2_trim150_scaffold_220_20
Bizionia argentinensis, Bizionia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23842..24342)
DNA (501bp) protein (167aa)
Prokaryotic transcription elongation factor, GreA/GreB, C-terminal domain protein n=1 Tax=Bizionia argentinensis JUB59 RepID=G2EA22_9FLAO
Prokaryotic transcription elongation factor, GreA/GreB, C-terminal domain protein {ECO:0000313|EMBL:EGV44709.1}; TaxID=1046627 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bizionia.;" source="Bizionia argentinensis JUB59.;"
GreA/GreB family elongation factor; K04760 transcription elongation factor GreB
scnpilot_solids2_trim150_scaffold_220_21
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24559..25074
DNA (516bp) protein (172aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC24185.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
scnpilot_solids2_trim150_scaffold_220_22
unknown

Not on your lists

25086..25463
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Elizabethkingia meningoseptica RepID=UPI0003732E10
scnpilot_solids2_trim150_scaffold_220_23
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

25477..25965
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Bergeyella zoohelcum CCUG 30536 RepID=K1LPA5_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFE97157.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
scnpilot_solids2_trim150_scaffold_220_24
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

26070..27035
DNA (966bp) protein (322aa)
Putative transmembrane protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X4M3_FLAB3 rbh
transmembrane protein rbh
Putative transmembrane protein {ECO:0000313|EMBL:ACU07361.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
scnpilot_solids2_trim150_scaffold_220_25
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

27346..27951
DNA (606bp) protein (202aa)
FAH family protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W419_9FLAO rbh
FAH family protein {ECO:0000313|EMBL:EFK32961.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
fumarylacetoacetate (faa) hydrolase rbh
scnpilot_solids2_trim150_scaffold_220_26
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27948..28364)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S581_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY52026.1}; Flags: Precursor;; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
scnpilot_solids2_trim150_scaffold_220_27
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(28330..28620)
DNA (291bp) protein (97aa)
Putative uncharacterized protein n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11VK0_CYTH3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG58566.1}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;"
scnpilot_solids2_trim150_scaffold_220_28
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

28657..29307
DNA (651bp) protein (217aa)
upp; uracil phosphoribosyltransferase (EC:2.4.2.9); K00761 uracil phosphoribosyltransferase [EC:2.4.2.9] rbh
Uracil phosphoribosyltransferase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X3Y2_FLAB3 rbh
Uracil phosphoribosyltransferase {ECO:0000313|EMBL:KFE99552.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
scnpilot_solids2_trim150_scaffold_220_29
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29343..30077)
DNA (735bp) protein (245aa)
Competence protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X3Y3_FLAB3 rbh
competence protein rbh
Competence protein {ECO:0000313|EMBL:ACU07121.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
scnpilot_solids2_trim150_scaffold_220_30
Riemerella anatipestifer, Riemerella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

30142..30510
DNA (369bp) protein (123aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase n=4 Tax=Riemerella anatipestifer RepID=E4TBV1_RIEAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD56000.1}; TaxID=693978 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella.;" source="Riemerella anatipestifer (strain ATCC 11845 / DSM 15868 / JCM 9532 /; NCTC 11014).;"
Displaying items 1-30 of 67 in total

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