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scnpilot_solids2_trim150_scaffold_17

Search features with annotation key words

Displaying items 1-30 of 340 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_17_1
unknown

Not on your lists

comp(1..174)
DNA (174bp) protein (58aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_17_2
Pseudomonas sp. G5(2012), Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1218..2735)
DNA (1518bp) protein (506aa)
O-Antigen ligase n=1 Tax=Pseudomonas sp. G5(2012) RepID=S2EYA6_9PSED rbh
O-Antigen ligase {ECO:0000313|EMBL:EPA94684.1}; TaxID=1268068 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. G5(2012).;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_17_3
Ralstonia sp. GA3-3, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2823..3938)
DNA (1116bp) protein (372aa)
h16_A1866; acyltransferase (EC:2.3.1.-)
acyltransferase n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003B40BFC rbh
Acyltransferase {ECO:0000313|EMBL:EON18964.1}; TaxID=1229514 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. GA3-3.;"
scnpilot_solids2_trim150_scaffold_17_4
Chlorobium limicola, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(3971..5011)
DNA (1041bp) protein (347aa)
Putative uncharacterized protein n=1 Tax=Chlorobium limicola (strain DSM 245 / NBRC 103803) RepID=B3EF26_CHLL2 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACD90888.1}; TaxID=290315 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium limicola (strain DSM 245 / NBRC 103803).;"
scnpilot_solids2_trim150_scaffold_17_5
Azotobacter chroococcum, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5076..6875
DNA (1800bp) protein (600aa)
ABC transporter protein n=3 Tax=Azotobacter vinelandii RepID=C1DM72_AZOVD rbh
Uncharacterized protein {ECO:0000313|EMBL:AJE21249.1}; TaxID=1328314 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter chroococcum NCIMB 8003.;"
ABC transporter protein rbh
scnpilot_solids2_trim150_scaffold_17_6
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6889..7833
DNA (945bp) protein (315aa)
Glycosyl transferase 2 family protein n=1 Tax=Pseudomonas putida S610 RepID=V6J3Z7_PSEPU rbh
Glycosyl transferase 2 family protein {ECO:0000313|EMBL:EST14623.1}; TaxID=1399145 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida S610.;"
glycosyl transferase; K07011 rbh
scnpilot_solids2_trim150_scaffold_17_7
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7844..8347
DNA (504bp) protein (168aa)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
Serine acetyltransferase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S578_9SPHN
serine O-acetyltransferase
scnpilot_solids2_trim150_scaffold_17_8
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8442..8717
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WA86_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM43161.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_solids2_trim150_scaffold_17_9
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8721..9149
DNA (429bp) protein (143aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
Ribonuclease VapC n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WA87_ACISJ
PilT domain-containing protein
scnpilot_solids2_trim150_scaffold_17_10
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9399..10760
DNA (1362bp) protein (454aa)
Fic {ECO:0000313|EMBL:AEV60834.1}; EC=6.3.2.2 {ECO:0000313|EMBL:AEV60834.1};; TaxID=1114970 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens F113.;"
Fic n=1 Tax=Pseudomonas fluorescens F113 RepID=G8Q7B9_PSEFL
fic; hypothetical protein
scnpilot_solids2_trim150_scaffold_17_11
Pseudomonas sp. 10-1B, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10910..11884
DNA (975bp) protein (325aa)
Glycosyl transferase 2 family protein n=1 Tax=Pseudomonas putida S610 RepID=V6J3Z6_PSEPU rbh
Glycosyl transferase {ECO:0000313|EMBL:KIY40461.1}; TaxID=1546029 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 10-1B.;"
glycosyl transferase family protein rbh
scnpilot_solids2_trim150_scaffold_17_12
Silicibacter sp. TrichCH4B, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11890..12912
DNA (1023bp) protein (341aa)
Putative uncharacterized protein n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9CZ96_9RHOB
Putative uncharacterized protein {ECO:0000313|EMBL:EEW58805.1}; TaxID=644076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Silicibacter sp. TrichCH4B.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_17_13
Ralstonia sp. AU12-08, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12965..13645
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Ralstonia sp. AU12-08 RepID=S9T8I4_9RALS
Uncharacterized protein {ECO:0000313|EMBL:EPX98550.1}; TaxID=1235457 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. AU12-08.;"
transposase, IS4 family protein
scnpilot_solids2_trim150_scaffold_17_14
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13659..14384
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VAH1_SPHWW
Uncharacterized protein {ECO:0000313|EMBL:KKC23725.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_17_15
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

14414..15292
DNA (879bp) protein (293aa)
Glycosyl transferase family 11 n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VQC5_9CYAN
Glycosyl transferase family 11 {ECO:0000313|EMBL:EDX75674.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthonoplastes PCC 7420.;"
wcfB; fucosyl transferase
scnpilot_solids2_trim150_scaffold_17_16
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15304..16521
DNA (1218bp) protein (406aa)
Glycoside hydrolase n=1 Tax=Pseudomonas putida H8234 RepID=R9V546_PSEPU rbh
glycoside hydrolase rbh
Glycoside hydrolase {ECO:0000313|EMBL:AGN79251.1}; TaxID=1331671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida H8234.;"
scnpilot_solids2_trim150_scaffold_17_17
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16518..17717
DNA (1200bp) protein (400aa)
Glycosyl transferase 2 family protein n=1 Tax=Pseudomonas putida S610 RepID=V6J5X6_PSEPU rbh
Glycosyl transferase 2 family protein {ECO:0000313|EMBL:EST14626.1}; TaxID=1399145 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida S610.;"
putative glycosyltransferase rbh
scnpilot_solids2_trim150_scaffold_17_18
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17714..18487
DNA (774bp) protein (258aa)
Teichoic acid biosynthesis protein; K05946 N-acetylglucosaminyldiphosphoundecaprenol [EC:2.4.1.187]
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI000364D71C
N-acetylglucosaminyldiphospho-UDP N-acetyl-beta-D-mannosaminyltransferase {ECO:0000313|EMBL:GAO34684.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
scnpilot_solids2_trim150_scaffold_17_19
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18562..18771
DNA (210bp) protein (70aa)
DNA damage-inducible protein n=1 Tax=Thauera terpenica 58Eu RepID=S9ZLE3_9RHOO
RelB/DinJ family addiction module antitoxin; K07473 DNA-damage-inducible protein J
DNA damage-inducible protein {ECO:0000313|EMBL:EPZ15451.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
scnpilot_solids2_trim150_scaffold_17_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18956..20422
DNA (1467bp) protein (489aa)
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase {ECO:0000313|EMBL:KFJ14180.1}; EC=5.3.1.8 {ECO:0000313|EMBL:KFJ14180.1};; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
mannose-1-phosphate guanyltransferase n=1 Tax=Acidovorax avenae RepID=UPI00036B5146 rbh
xanthan biosynthesis protein xanB-like rbh
scnpilot_solids2_trim150_scaffold_17_21
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20474..22024
DNA (1551bp) protein (517aa)
Eight transmembrane protein EpsH n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07SN6_RHOP5 rbh
eight transmembrane protein EpsH rbh
Eight transmembrane protein EpsH {ECO:0000313|EMBL:ABJ05048.1}; Flags: Precursor;; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
scnpilot_solids2_trim150_scaffold_17_22
Methylophilaceae bacterium 11, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22125..24545
DNA (2421bp) protein (807aa)
hypothetical protein n=1 Tax=Methylotenera RepID=UPI000380F498 rbh
Uncharacterized protein {ECO:0000313|EMBL:EUJ10290.1}; TaxID=1101195 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae.;" source="Methylophilaceae bacterium 11.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_17_23
Methylophilaceae bacterium 11, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24552..25400
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Methylotenera sp. 1P/1 RepID=UPI0003808B99 rbh
Type II secretory pathway, component ExeA (Predicted ATPase) {ECO:0000313|EMBL:EUJ10291.1}; TaxID=1101195 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae.;" source="Methylophilaceae bacterium 11.;"
general secretion pathway protein-related protein rbh
scnpilot_solids2_trim150_scaffold_17_24
unknown

Not on your lists

25514..26218
DNA (705bp) protein (235aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_17_25
unknown

Not on your lists

26400..27182
DNA (783bp) protein (261aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_17_26
unknown

Not on your lists

27298..28059
DNA (762bp) protein (254aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_17_27
Methylobacillus sp. 12S, Methylobacillus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28115..28942)
DNA (828bp) protein (276aa)
Transcriptional regulator, LuxR family n=2 Tax=Methylophilaceae RepID=E4QJG7_METS6
LuxR family transcriptional regulator
Transcription regulator like protein EpsA {ECO:0000313|EMBL:BAC41336.1}; TaxID=94001 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylobacillus.;" source="Methylobacillus sp. 12S.;"
scnpilot_solids2_trim150_scaffold_17_trna_4
unknown

Not on your lists

comp(29141..29228)
DNA (88bp)
transferRNA Ser
scnpilot_solids2_trim150_scaffold_17_28
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29252..30619)
DNA (1368bp) protein (456aa)
multidrug transporter MatE n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI000377C1B5 rbh
Na+-driven multidrug efflux pump {ECO:0000313|EMBL:GAD23484.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
mate efflux family protein; K03327 multidrug resistance protein, MATE family rbh
scnpilot_solids2_trim150_scaffold_17_29
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30619..32295)
DNA (1677bp) protein (559aa)
Putative inner membrane transmembrane protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W8F0_ACISJ
putative inner membrane transmembrane protein
Putative inner membrane transmembrane protein {ECO:0000313|EMBL:ABM42525.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
Displaying items 1-30 of 340 in total

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