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scnpilot_solids2_trim150_scaffold_24

Search features with annotation key words

Displaying items 1-30 of 383 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_24_1
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13..531)
DNA (519bp) protein (173aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G2G4_HERAR
transcriptional repressor for high-affinity phosphate uptake; K02039 phosphate transport system protein
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
scnpilot_solids2_trim150_scaffold_24_2
CG_Rhodof_03, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(560..1405)
DNA (846bp) protein (282aa)
pstB2; phosphate import ATP-binding protein (EC:3.6.3.27); K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27] rbh
Phosphate import ATP-binding protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G2G3_HERAR rbh
Tax=CG_Rhodof_03
scnpilot_solids2_trim150_scaffold_24_3
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1446..3101)
DNA (1656bp) protein (552aa)
Putative ABC-type phosphate transport system, auxiliary and permease component n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G2G2_HERAR rbh
membrane protein component of ABC phosphate transporter pstA-like; K02038 phosphate transport system permease protein rbh
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
scnpilot_solids2_trim150_scaffold_24_4
CG_Rhodof_03, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3116..5377)
DNA (2262bp) protein (754aa)
Putative ABC-type phosphate transport system, permease component n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G2G1_HERAR rbh
ABC transporter permease; K02037 phosphate transport system permease protein rbh
Tax=CG_Rhodof_03
scnpilot_solids2_trim150_scaffold_24_5
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5466..6107)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G2G0_HERAR
signal peptide
Uncharacterized protein {ECO:0000313|EMBL:CAL60697.1}; TaxID=204773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas.;" source="Herminiimonas arsenicoxydans.;"
scnpilot_solids2_trim150_scaffold_24_6
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6157..7137)
DNA (981bp) protein (327aa)
ABC-type phosphate transport system, periplasmic component n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G2F9_HERAR rbh
ABC-type phosphate transport system periplasmic protein; K02040 phosphate transport system substrate-binding protein rbh
ABC-type phosphate transport system, periplasmic component {ECO:0000313|EMBL:CAL60696.1}; TaxID=204773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas.;" source="Herminiimonas arsenicoxydans.;"
scnpilot_solids2_trim150_scaffold_24_7
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7191..7355)
DNA (165bp) protein (55aa)
Phosphate ABC transporter, phosphate-binding protein PstS n=1 Tax=Acinetobacter nectaris CIP 110549 RepID=V2TLK9_9GAMM
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
pstS; ABC transporter phosphate-binding protein; K02040 phosphate transport system substrate-binding protein
scnpilot_solids2_trim150_scaffold_24_8
Acinetobacter nectaris, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7355..7741)
DNA (387bp) protein (129aa)
Phosphate ABC transporter, phosphate-binding protein PstS n=1 Tax=Acinetobacter nectaris CIP 110549 RepID=V2TLK9_9GAMM
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; TaxID=1392540 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter nectaris CIP 110549.;"
phosphate ABC transporter periplasmic phosphate-binding protein; K02040 phosphate transport system substrate-binding protein
scnpilot_solids2_trim150_scaffold_24_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7775..8188)
DNA (414bp) protein (138aa)
Transcriptional regulator, ArsR family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFI8_NITHX
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ABE65009.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
scnpilot_solids2_trim150_scaffold_24_10
unknown

Not on your lists

comp(8422..8541)
DNA (120bp) protein (40aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_24_11
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8590..9498
DNA (909bp) protein (303aa)
Transcriptional regulator, LysR family n=15 Tax=Proteobacteria RepID=C6BDK0_RALP1 rbh
LysR family transcriptional regulator rbh
D-alanyl-D-alanine endopeptidase {ECO:0000313|EMBL:AJE97696.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
scnpilot_solids2_trim150_scaffold_24_12
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10040..10798
DNA (759bp) protein (253aa)
Uncharacterized protein n=12 Tax=Proteobacteria RepID=C6BDK1_RALP1 rbh
hypothetical protein rbh
Receptor protein-tyrosine kinase {ECO:0000313|EMBL:AJF00749.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
scnpilot_solids2_trim150_scaffold_24_13
Ralstonia mannitolilytica, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10940..11158
DNA (219bp) protein (73aa)
Transcriptional regulator, AlpA family n=1 Tax=Burkholderia multivorans ATCC BAA-247 RepID=J5BPH3_9BURK
Transcriptional regulator {ECO:0000313|EMBL:AJW44596.1}; TaxID=105219 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia mannitolilytica.;"
phage transcriptional regulator AlpA; K07733 prophage regulatory protein
scnpilot_solids2_trim150_scaffold_24_14
Thauera aminoaromatica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11199..12065
DNA (867bp) protein (289aa)
Cobyrinic acid ac-diamide synthase n=7 Tax=Proteobacteria RepID=N6Y473_9RHOO rbh
Cobyrinic acid ac-diamide synthase {ECO:0000313|EMBL:ENO88976.1}; TaxID=1234381 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera aminoaromatica S2.;"
cobyrinic acid ac-diamide synthase rbh
scnpilot_solids2_trim150_scaffold_24_15
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12049..12306
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BDK4_RALP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS61939.1}; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12D).;"
scnpilot_solids2_trim150_scaffold_24_16
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12299..13978
DNA (1680bp) protein (560aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BDK5_RALP1 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACS61940.1}; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12D).;"
scnpilot_solids2_trim150_scaffold_24_17
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13992..14552
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BDK6_RALP1 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACS61941.1}; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12D).;"
scnpilot_solids2_trim150_scaffold_24_18
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14556..15815
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BDK7_RALP1 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACS61942.1}; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12D).;"
scnpilot_solids2_trim150_scaffold_24_19
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16045..16818
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa PA45 RepID=N4VX83_PSEAI rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACS61943.1}; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12D).;"
scnpilot_solids2_trim150_scaffold_24_20
Thauera aminoaromatica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16815..17366
DNA (552bp) protein (184aa)
PF11358 family protein n=1 Tax=Burkholderia multivorans ATCC BAA-247 RepID=J4JKA8_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:ENO88982.1}; TaxID=1234381 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera aminoaromatica S2.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_24_21
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17363..17812
DNA (450bp) protein (150aa)
Single-stranded DNA-binding protein n=1 Tax=Burkholderia multivorans ATCC BAA-247 RepID=J5BUY7_9BURK rbh
Single-stranded DNA-binding protein {ECO:0000256|PIRNR:PIRNR002070, ECO:0000313|EMBL:AJE97688.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
single-stranded DNA-binding protein; K03111 single-strand DNA-binding protein rbh
scnpilot_solids2_trim150_scaffold_24_22
Alcaligenes sp. EGD-AK7, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18091..20121
DNA (2031bp) protein (677aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=1386079 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes sp. EGD-AK7.;"
DNA topoisomerase III (EC:5.99.1.2) rbh
DNA topoisomerase n=1 Tax=Pseudomonas aeruginosa WC55 RepID=T5L084_PSEAI rbh
scnpilot_solids2_trim150_scaffold_24_23
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20632..21369)
DNA (738bp) protein (246aa)
Arsenical resistance protein ArsH n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BDL2_RALP1 rbh
arsenical resistance protein ArsH; K11811 arsenical resistance protein ArsH rbh
Arsenical resistance protein ArsH {ECO:0000313|EMBL:ACS61947.1}; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12D).;"
scnpilot_solids2_trim150_scaffold_24_24
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21347..21769)
DNA (423bp) protein (141aa)
arsenate reductase; K00537 arsenate reductase [EC:1.20.4.1]
Arsenate reductase {ECO:0000256|RuleBase:RU362029}; EC=1.20.4.1 {ECO:0000256|RuleBase:RU362029};; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12D).;"
Arsenate reductase n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BDL3_RALP1
scnpilot_solids2_trim150_scaffold_24_25
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21766..22998)
DNA (1233bp) protein (411aa)
Major facilitator superfamily MFS_1 n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BDL4_RALP1 rbh
major facilitator superfamily protein rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACS61949.1}; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12D).;"
scnpilot_solids2_trim150_scaffold_24_26
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23001..24023)
DNA (1023bp) protein (341aa)
Sodium bile acid symporter family protein n=1 Tax=Pseudomonas stutzeri (strain A1501) RepID=A4VG41_PSEU5 rbh
sodium bile acid symporter family protein; K03325 arsenite transporter, ACR3 family rbh
Sodium bile acid symporter family protein {ECO:0000313|EMBL:ABP77942.1}; TaxID=379731 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain A1501).;"
scnpilot_solids2_trim150_scaffold_24_27
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24085..24588)
DNA (504bp) protein (168aa)
arsenate reductase, putative; K03741 arsenate reductase [EC:1.20.4.1] rbh
Arsenate reductase, putative n=1 Tax=Pseudomonas stutzeri (strain A1501) RepID=A4VG42_PSEU5 rbh
Arsenate reductase, putative {ECO:0000313|EMBL:ABP77943.1}; TaxID=379731 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain A1501).;"
scnpilot_solids2_trim150_scaffold_24_28
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24590..26362)
DNA (1773bp) protein (591aa)
arsenical pump-driving ATPase; K01551 arsenite-transporting ATPase [EC:3.6.3.16] rbh
Arsenical pump-driving ATPase n=1 Tax=Pseudomonas stutzeri (strain A1501) RepID=A4VG43_PSEU5 rbh
Arsenical pump-driving ATPase {ECO:0000313|EMBL:ABP77944.1}; TaxID=379731 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain A1501).;"
scnpilot_solids2_trim150_scaffold_24_29
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26378..26737)
DNA (360bp) protein (120aa)
Arsenical resistance operon trans-acting repressor n=1 Tax=Azoarcus sp. KH32C RepID=H0Q4L4_9RHOO
arsD; arsenical resistance operon trans-acting repressor
Arsenical resistance operon trans-acting repressor {ECO:0000313|EMBL:BAL26927.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
scnpilot_solids2_trim150_scaffold_24_30
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26796..27203)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Methylotenera mobilis RepID=UPI000369BADD
hypothetical protein
Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
Displaying items 1-30 of 383 in total

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