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scnpilot_solids2_trim150_scaffold_180

Search features with annotation key words

Displaying items 1-30 of 110 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_180_1
unknown

Not on your lists

1..198
DNA (198bp) protein (66aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_180_2
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(280..3486)
DNA (3207bp) protein (1069aa)
N6 adenine-specific DNA methyltransferase protein, N12 class n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VRC3_POLNA rbh
N6 adenine-specific DNA methyltransferase protein, N12 class rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_solids2_trim150_scaffold_180_3
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3645..4412
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035D5065 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD24181.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_180_4
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4449..4889
DNA (441bp) protein (147aa)
universal stress protein UspA n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036CABB4
Universal stress protein {ECO:0000256|PIRNR:PIRNR006276}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
UspA domain-containing protein
scnpilot_solids2_trim150_scaffold_180_5
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5045..5512)
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Acidovorax avenae RepID=UPI00035E5F5A
Uncharacterized protein {ECO:0000313|EMBL:KJA12393.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
hypothetical protein; K09005 hypothetical protein
scnpilot_solids2_trim150_scaffold_180_6
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5608..5835)
DNA (228bp) protein (76aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO22918.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_solids2_trim150_scaffold_180_7
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5987..6934)
DNA (948bp) protein (316aa)
spermidine synthase (EC:2.5.1.16); K00797 spermidine synthase [EC:2.5.1.16] rbh
Spermidine synthase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W415_ACISJ rbh
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_solids2_trim150_scaffold_180_8
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6940..7365)
DNA (426bp) protein (142aa)
s-adenosylmethionine decarboxylase proenzyme; K01611 S-adenosylmethionine decarboxylase [EC:4.1.1.50]
S-adenosylmethionine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00464}; Short=AdoMetDC {ECO:0000256|HAMAP-Rule:MF_00464};; Short=SAMDC {ECO:0000256|HAMAP-Rule:MF_00464};; EC=4.1.1.50 {ECO:0000256|HAMAP-Rule:MF_00464};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
S-adenosylmethionine decarboxylase proenzyme n=2 Tax=Alicycliphilus denitrificans RepID=E8U078_ALIDB
scnpilot_solids2_trim150_scaffold_180_9
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7567..8397
DNA (831bp) protein (277aa)
UPI0003D3EFB5 related cluster n=1 Tax=unknown RepID=UPI0003D3EFB5 rbh
ABC-type transport system involved in resistance to organic solvents, ATPase component {ECO:0000313|EMBL:GAD23123.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
ABC transporter; K02065 putative ABC transport system ATP-binding protein rbh
scnpilot_solids2_trim150_scaffold_180_10
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8394..9176
DNA (783bp) protein (261aa)
Uncharacterized protein n=2 Tax=Acidovorax RepID=A1W418_ACISJ rbh
hypothetical protein; K02066 putative ABC transport system permease protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABM40993.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_solids2_trim150_scaffold_180_11
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9188..9676
DNA (489bp) protein (163aa)
Mammalian cell entry related domain protein n=2 Tax=Acidovorax RepID=A1TKX5_ACIAC
mammalian cell entry related domain-containing protein; K02067 putative ABC transport system substrate-binding protein
Mammalian cell entry related domain protein {ECO:0000313|EMBL:ABM31613.1}; Flags: Precursor;; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
scnpilot_solids2_trim150_scaffold_180_12
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9673..10419
DNA (747bp) protein (249aa)
VacJ family lipoprotein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G7T3_ALIDK rbh
VacJ family lipoprotein; K04754 lipoprotein rbh
VacJ family lipoprotein {ECO:0000313|EMBL:AEB83236.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scnpilot_solids2_trim150_scaffold_180_13
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10419..11063
DNA (645bp) protein (215aa)
Toluene tolerance family protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MDU5_ACIET rbh
toluene tolerance family protein; K07323 putative toluene tolerance protein rbh
Toluene tolerance family protein {ECO:0000313|EMBL:ACM32199.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scnpilot_solids2_trim150_scaffold_180_14
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11077..11349
DNA (273bp) protein (91aa)
anti-sigma-factor antagonist n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000376C28F
Sulfate transporter/antisigma-factor antagonist STAS {ECO:0000313|EMBL:GAD23128.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
sulfate transporter/antisigma-factor antagonist stas; K07122
scnpilot_solids2_trim150_scaffold_180_15
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11346..11609
DNA (264bp) protein (88aa)
Diguanylate cyclase n=2 Tax=Alicycliphilus denitrificans RepID=E8U085_ALIDB
PAS/PAC sensor-containing diguanylate cyclase
Diguanylate cyclase with PAS/PAC sensor {ECO:0000313|EMBL:AEB83239.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scnpilot_solids2_trim150_scaffold_180_16
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11618..12700
DNA (1083bp) protein (361aa)
Diguanylate cyclase n=2 Tax=Alicycliphilus denitrificans RepID=E8U085_ALIDB
PAS/PAC sensor-containing diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:ADU98633.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scnpilot_solids2_trim150_scaffold_180_17
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12715..13644
DNA (930bp) protein (310aa)
ABC transporter ATP-binding protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036C4659 rbh
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:GAD23129.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
ABC transporter-like protein; K09687 antibiotic transport system ATP-binding protein rbh
scnpilot_solids2_trim150_scaffold_180_18
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13641..14396
DNA (756bp) protein (252aa)
metal-dependent hydrolase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037E8869 rbh
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
ABC transporter; K09686 antibiotic transport system permease protein rbh
scnpilot_solids2_trim150_scaffold_180_19
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14420..14671
DNA (252bp) protein (84aa)
BolA family transcriptional regulator n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036ACF22
Predicted transcriptional regulator {ECO:0000313|EMBL:GAD23131.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
bola family protein
scnpilot_solids2_trim150_scaffold_180_20
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14759..16000
DNA (1242bp) protein (414aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7); K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] rbh
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G7U0_ALIDK rbh
scnpilot_solids2_trim150_scaffold_180_21
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16123..16761
DNA (639bp) protein (213aa)
hisG; ATP phosphoribosyltransferase catalytic subunit (EC:2.4.2.17) rbh
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00008790}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_01018};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_01018};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00046302};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
ATP phosphoribosyltransferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HV11_9BURK rbh
scnpilot_solids2_trim150_scaffold_180_22
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16792..18114
DNA (1323bp) protein (441aa)
histidinol dehydrogenase (EC:1.1.1.23); K00013 histidinol dehydrogenase [EC:1.1.1.23] rbh
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Histidinol dehydrogenase n=2 Tax=Alicycliphilus denitrificans RepID=E8U091_ALIDB rbh
scnpilot_solids2_trim150_scaffold_180_23
Aspergillus kawachii, Aspergillus, Eurotiales, Eurotiomycetidae, Ascomycota, Fungi

Not on your lists

18296..18718
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Aspergillus kawachii (strain NBRC 4308) RepID=G7XA23_ASPKW
Uncharacterized protein {ECO:0000313|EMBL:GAA83722.1}; TaxID=1033177 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus.;" source="Aspergillus kawachii (strain NBRC 4308) (White koji mold) (Aspergillus; awamori var. kawachi).;"
An11g05810; hypothetical protein
scnpilot_solids2_trim150_scaffold_180_24
unknown

Not on your lists

18885..20024
DNA (1140bp) protein (380aa)
hypothetical protein n=1 Tax=Oceanicola sp. S124 RepID=UPI000255825B
scnpilot_solids2_trim150_scaffold_180_25
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20106..21047
DNA (942bp) protein (314aa)
Transcriptional regulator, AraC family n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V4G1_SPHWW
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ABQ67177.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
scnpilot_solids2_trim150_scaffold_180_26
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21244..21558
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003679FCF
Uncharacterized protein {ECO:0000313|EMBL:GAD23731.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_180_27
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21774..22877
DNA (1104bp) protein (368aa)
hisC1; histidinol-phosphate aminotransferase HisC (EC:2.6.1.9) rbh
histidinol-phosphate aminotransferase n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI00031CB9E3 rbh
Tax=GWA2_Curvibacter_64_110_curated
scnpilot_solids2_trim150_scaffold_180_28
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22874..23497
DNA (624bp) protein (208aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599};; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19); K01693 imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] rbh
imidazoleglycerol-phosphate dehydratase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000366C6D7 rbh
scnpilot_solids2_trim150_scaffold_180_29
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23546..24214
DNA (669bp) protein (223aa)
hisH; imidazole glycerol phosphate synthase subunit HisH (EC:2.4.2.-); K02501 glutamine amidotransferase [EC:2.4.2.-] rbh
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
Imidazole glycerol phosphate synthase subunit HisH n=2 Tax=Acidovorax RepID=A1W433_ACISJ rbh
scnpilot_solids2_trim150_scaffold_180_30
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24265..25041
DNA (777bp) protein (259aa)
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC:5.3.1.16); K01814 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] rbh
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (stra
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=2 Tax=Alicycliphilus denitrificans RepID=E8U097_ALIDB rbh
Displaying items 1-30 of 110 in total

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