ggKbase home page

scnpilot_solids2_trim150_scaffold_17_31

Organism: SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 ASCG 10 / 38
Location: comp(32851..34113)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.8
  • Coverage: 420.0
  • Bit_score: 774
  • Evalue 1.10e-220
Transcription termination factor Rho n=1 Tax=Comamonas testosteroni (strain CNB-2) RepID=D0J225_COMT2 similarity UNIREF
DB: UNIREF100
  • Identity: 93.8
  • Coverage: 420.0
  • Bit_score: 774
  • Evalue 7.70e-221
  • rbh
Ktermination factor Rho; K03628 transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 93.8
  • Coverage: 420.0
  • Bit_score: 774
  • Evalue 2.40e-221
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Comamonas testosteroni → Comamonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1263
ATGCACCTGAACGAATTGAAGGCCCTGCACGTCTCCGAAGTGCTCAAGCAGGCCGAAGCCCTGGATATCGAAAACGGCGGCCGCATGCGCAAGCAGGAGCTGATGTTCGCCATCATCAAGAAGCGCGCCAAGAATGGCGAACAGATCTTCGCCGACGGCGTGCTCGAAATCCTGCCCGACGGCTTCGGCTTCCTGCGCAGCCCCGACACCAGCTACACCGCCAGCACCGACGACATCTACATCAGCCCCAGCCAGGTGCGCCGCTTCAACCTGCACACCGGCGACATGATCGAAGGCGAGGTGCGCACGCCCAAGGATGGCGAGCGCTATTTCGCATTGAACAAGCTGGAAAAGGTCAACGGCGACCTGCCCGAGAAGAACAAGCACAAGGTGATGTTCGAAAACCTCACGCCGCTGTTCCCCAAGGAGCAGATGAAGCTGGAACGCGACATCAAGGGCGAGGAGAACATCACCGGCCGCATCATCGACATCATCGCGCCCATAGGCCGCGGCCAGCGCGCGCTGATCGTCGCGCCGCCCAAGAGCGGCAAGACAGTGATGATGCAGAGCATCGCGCACGCCATCACCGCCAACTACCCGGACGTGACGCTGATGGTGCTGCTGGTCGATGAACGCCCCGAGGAAGTGACCGAGATGCAGCGCTCGGTGCGCGGCGAGATCATCGCCTCCACCTTCGACGAGCCCGCCACGCGGCACGTGCACGTGGCCGAGATGGTGATCGAGCGCGCCAAGCGCCTGGTCGAACTCGGCAAGGACGTGGTCATCCTGCTCGACTCCATCACGCGCCTGGCGCGCGCCTACAACAATGTCGTGCCGTCCTCGGGCAAAGTGCTCACCGGCGGCGTCGATTCCAACGCGCTGCAGCGCCCCAAGCGCTTCTTCGGCGCGGCGCGCAACATCGAGGAAGGCGGCAGCCTCACCATCATCGCCACCGCGCTGGTCGATACCGGCAGCCGCATGGACGAGGTGATCTTTGAAGAATTCAAGGGCACCGGCAACAGCGAACTGCACCTGAACCGGCGCCTGTACGAAAAGCGCGTGTTCCCGGCGATCGAACTCAACAAGAGCGGCACGCGCCGCGAAGAGCTGCTGCTCGCGCCCGAGATCCTGCAGAAGACCCGCATCCTGCGCCAGTTCATGTACAACATGGACGAGATCGAATCGATGGAACTGATGATCAAGAAGATGCGCGAGACCAAGAGCAACGTCGACTTCTTCGAGGCCATGCGCCGCGGCGGCTGA
PROTEIN sequence
Length: 421
MHLNELKALHVSEVLKQAEALDIENGGRMRKQELMFAIIKKRAKNGEQIFADGVLEILPDGFGFLRSPDTSYTASTDDIYISPSQVRRFNLHTGDMIEGEVRTPKDGERYFALNKLEKVNGDLPEKNKHKVMFENLTPLFPKEQMKLERDIKGEENITGRIIDIIAPIGRGQRALIVAPPKSGKTVMMQSIAHAITANYPDVTLMVLLVDERPEEVTEMQRSVRGEIIASTFDEPATRHVHVAEMVIERAKRLVELGKDVVILLDSITRLARAYNNVVPSSGKVLTGGVDSNALQRPKRFFGAARNIEEGGSLTIIATALVDTGSRMDEVIFEEFKGTGNSELHLNRRLYEKRVFPAIELNKSGTRREELLLAPEILQKTRILRQFMYNMDEIESMELMIKKMRETKSNVDFFEAMRRGG*