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scnpilot_solids2_trim150_scaffold_7

Search features with annotation key words

Displaying items 1-30 of 303 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_7_1
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..592
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6I4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI51931.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_7_trna_7
unknown

Not on your lists

comp(89..175)
DNA (87bp)
transferRNA Ser
scnpilot_solids2_trim150_scaffold_7_2
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(658..1752)
DNA (1095bp) protein (365aa)
potA2; spermidine/putrescine import ATP-binding protein PotA (EC:3.6.3.31) rbh
ABC transporter related protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6I5_9BRAD rbh
ABC transporter related protein {ECO:0000313|EMBL:EFI51932.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
scnpilot_solids2_trim150_scaffold_7_3
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1762..3462)
DNA (1701bp) protein (567aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6I6_9BRAD rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EFI51933.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
binding-protein-dependent transport system inner membrane protein; K02011 iron(III) transport system permease protein rbh
scnpilot_solids2_trim150_scaffold_7_4
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3518..4855)
DNA (1338bp) protein (446aa)
Extracellular solute-binding protein family 1 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6I7_9BRAD rbh
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:EFI51934.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
family 1 extracellular solute-binding protein rbh
scnpilot_solids2_trim150_scaffold_7_5
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5025..8186)
DNA (3162bp) protein (1054aa)
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6I8_9BRAD rbh
Toluene efflux pump membrane transporter TtgB {ECO:0000313|EMBL:CEG08059.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
acrB2; acriflavine resistance protein AcrB; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family rbh
scnpilot_solids2_trim150_scaffold_7_6
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8193..9062)
DNA (870bp) protein (290aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6I9_9BRAD rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EFI51936.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
acrE; acriflavine resistance protein E; K03585 membrane fusion protein rbh
scnpilot_solids2_trim150_scaffold_7_7
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9762..10655
DNA (894bp) protein (298aa)
Cation diffusion facilitator family transporter n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6J0_9BRAD rbh
Ferrous-iron efflux pump FieF {ECO:0000313|EMBL:CEG08056.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
cation efflux protein rbh
scnpilot_solids2_trim150_scaffold_7_8
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10672..11028)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6J1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG08055.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_7_9
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11189..12064)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6J2_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EFI51939.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_7_10
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12061..12699)
DNA (639bp) protein (213aa)
Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6J3_9BRAD rbh
Putative transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:EFI51940.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
cyclic nucleotide-binding domain-containing protein rbh
scnpilot_solids2_trim150_scaffold_7_11
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12806..13630)
DNA (825bp) protein (275aa)
Metal-dependent hydrolase of the beta-lactamase superfamily I n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6J4_9BRAD rbh
Metal-dependent hydrolase of the beta-lactamase superfamily I {ECO:0000313|EMBL:EFI51941.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
metal-dependent hydrolase rbh
scnpilot_solids2_trim150_scaffold_7_12
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13696..15933)
DNA (2238bp) protein (746aa)
adenylate/guanylate cyclase (EC:4.6.1.1); K01768 adenylate cyclase [EC:4.6.1.1] rbh
Adenylate/guanylate cyclase with Chase sensor n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6J5_9BRAD rbh
Adenylate cyclase 2 {ECO:0000313|EMBL:CEG08051.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
scnpilot_solids2_trim150_scaffold_7_13
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16101..16298)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6J6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG08050.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_7_14
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16452..16676
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6J7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG08049.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_7_15
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16824..17561
DNA (738bp) protein (246aa)
Allophanate hydrolase subunit 1 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6J9_9BRAD rbh
Sporulation inhibitor KipI {ECO:0000313|EMBL:CEG08047.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
allophanate hydrolase subunit 1 rbh
scnpilot_solids2_trim150_scaffold_7_16
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17558..18490
DNA (933bp) protein (311aa)
Urea amidolyase related protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6K0_9BRAD rbh
Urea amidolyase related protein {ECO:0000313|EMBL:EFI51947.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
allophanate hydrolase subunit 2 rbh
scnpilot_solids2_trim150_scaffold_7_17
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18487..19242
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NPS1_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS28203.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
LamB/YcsF family protein; K07160 UPF0271 protein rbh
scnpilot_solids2_trim150_scaffold_7_18
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19255..20850)
DNA (1596bp) protein (532aa)
sulfite reductase (EC:1.8.1.2); K00380 sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] rbh
Oxidoreductase FAD/NAD(P)-binding domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6K3_9BRAD rbh
Oxidoreductase FAD/NAD(P)-binding domain protein {ECO:0000313|EMBL:EFI51950.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
scnpilot_solids2_trim150_scaffold_7_19
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20850..22619)
DNA (1770bp) protein (590aa)
Precorrin-3B synthase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6K4_9BRAD rbh
Precorrin-3B synthase {ECO:0000313|EMBL:EFI51951.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
ferredoxin--nitrite reductase rbh
scnpilot_solids2_trim150_scaffold_7_20
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(22642..23478)
DNA (837bp) protein (279aa)
Formate/nitrite transporter n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZVT4_OPITP rbh
formate/nitrite transporter rbh
Formate/nitrite transporter {ECO:0000313|EMBL:ACB75020.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
scnpilot_solids2_trim150_scaffold_7_21
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23785..25107
DNA (1323bp) protein (441aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=666684 species="Bacteria; Pro
rimO; ribosomal protein S12 methylthiotransferase RimO; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-] rbh
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6L1_9BRAD rbh
scnpilot_solids2_trim150_scaffold_7_22
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25224..26198)
DNA (975bp) protein (325aa)
quinone oxidoreductase (EC:1.6.5.5); K00344 NADPH2:quinone reductase [EC:1.6.5.5] rbh
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6L2_9BRAD rbh
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:EFI51959.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
scnpilot_solids2_trim150_scaffold_7_23
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26251..27006)
DNA (756bp) protein (252aa)
Integral membrane protein TerC n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6L3_9BRAD rbh
Integral membrane protein, YkoY family {ECO:0000313|EMBL:CEG08033.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
integral membrane protein, TerC family rbh
scnpilot_solids2_trim150_scaffold_7_24
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27003..27809)
DNA (807bp) protein (269aa)
Phosphatidylcholine synthase {ECO:0000256|PIRNR:PIRNR000851}; Short=PC synthase {ECO:0000256|PIRNR:PIRNR000851};; Short=PCS {ECO:0000256|PIRNR:PIRNR000851};; EC=2.7.8.24 {ECO:0000256|PIRNR:PIRNR000851};; CDP-diglyceride-choline O-phosphatidyltransferase {ECO:0000256|PIRNR:PIRNR000851}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
CDP-alcohol phosphatidyltransferase (EC:2.7.8.24); K01004 phosphatidylcholine synthase [EC:2.7.8.24] rbh
Phosphatidylcholine synthase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6L4_9BRAD rbh
scnpilot_solids2_trim150_scaffold_7_25
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27844..29037
DNA (1194bp) protein (398aa)
2-octaprenyl-6-methoxyphenyl hydroxylase; K03185 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] rbh
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6L5_9BRAD rbh
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family {ECO:0000313|EMBL:EFI51962.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
scnpilot_solids2_trim150_scaffold_7_26
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29060..29440
DNA (381bp) protein (127aa)
Hemimethylated DNA binding protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6L6_9BRAD
Heat shock protein HspQ {ECO:0000313|EMBL:CEG08029.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein; K11940 heat shock protein HspQ
scnpilot_solids2_trim150_scaffold_7_27
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29519..30262)
DNA (744bp) protein (248aa)
Invasion associated locus B family protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6L7_9BRAD rbh
Invasion associated locus B family protein {ECO:0000313|EMBL:EFI51964.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
invasion associated locus B family protein rbh
scnpilot_solids2_trim150_scaffold_7_28
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30517..32337
DNA (1821bp) protein (607aa)
Extracellular solute-binding protein family 5 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6L8_9BRAD rbh
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:EFI51965.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
extracellular solute-binding protein rbh
scnpilot_solids2_trim150_scaffold_7_29
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32334..33839
DNA (1506bp) protein (502aa)
AMP-dependent synthetase and ligase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6L9_9BRAD rbh
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EFI51966.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
AMP-dependent synthetase and ligase rbh
Displaying items 1-30 of 303 in total

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