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scnpilot_solids2_trim150_scaffold_147

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Displaying items 1-30 of 99 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_147_1
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(183..1382)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3L0_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EFI52540.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_147_2
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1492..2076
DNA (585bp) protein (195aa)
ChaC family protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3L1_9BRAD rbh
ChaC family protein {ECO:0000313|EMBL:EFI52541.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_147_3
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2089..2856)
DNA (768bp) protein (256aa)
hypothetical protein; K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] rbh
Phospholipid/glycerol acyltransferase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3L2_9BRAD rbh
2-acyl-glycerophospho-ethanolamine acyltransferase {ECO:0000313|EMBL:CEG06875.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
scnpilot_solids2_trim150_scaffold_147_4
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2856..3566)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3L3_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EFI52543.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_147_5
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3672..4610)
DNA (939bp) protein (313aa)
Cell division protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3L4_9BRAD rbh
Cell division protein FtsX {ECO:0000313|EMBL:CEG06873.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein; K09811 cell division transport system permease protein rbh
scnpilot_solids2_trim150_scaffold_147_6
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4634..5293)
DNA (660bp) protein (220aa)
Cell division ATP-binding protein FtsE n=1 Tax=Afipia felis ATCC 53690 RepID=K8NKL7_AFIFE rbh
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:EKS30852.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
ftsE; cell division ATP-binding protein FtsE; K09812 cell division transport system ATP-binding protein rbh
scnpilot_solids2_trim150_scaffold_147_7
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5453..6319
DNA (867bp) protein (289aa)
MJ0042 family finger-like protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3L6_9BRAD rbh
MJ0042 family finger-like protein {ECO:0000313|EMBL:EFI52546.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_147_8
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6319..6696
DNA (378bp) protein (126aa)
Response regulator receiver protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3L7_9BRAD
Mycobacterial persistence regulator A {ECO:0000313|EMBL:CEG06870.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
response regulator receiver protein
scnpilot_solids2_trim150_scaffold_147_9
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6690..9203)
DNA (2514bp) protein (838aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3L8_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EFI52548.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_147_10
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9319..10584)
DNA (1266bp) protein (422aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
lysA; diaminopimelate decarboxylase (EC:4.1.1.20); K01586 diaminopimelate decarboxylase [EC:4.1.1.20] rbh
Diaminopimelate decarboxylase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3L9_9BRAD rbh
scnpilot_solids2_trim150_scaffold_147_11
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10972..12369)
DNA (1398bp) protein (466aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
argH; argininosuccinate lyase ArgH (EC:4.3.2.1); K01755 argininosuccinate lyase [EC:4.3.2.1] rbh
Argininosuccinate lyase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3M1_9BRAD rbh
scnpilot_solids2_trim150_scaffold_147_12
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12461..13075
DNA (615bp) protein (205aa)
Redoxin domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3M2_9BRAD rbh
Redoxin domain protein {ECO:0000313|EMBL:EFI52552.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
thiol:disulfide interChange protein TlpA rbh
scnpilot_solids2_trim150_scaffold_147_13
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13155..13514
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NQZ0_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS30844.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
RNA signal recognition particle 4.5S RNA
scnpilot_solids2_trim150_scaffold_147_14
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13511..13702)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3M4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG06863.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_147_15
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13785..14684)
DNA (900bp) protein (300aa)
hbdA; 3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157); K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] rbh
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NKL0_AFIFE rbh
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:EKS30842.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
scnpilot_solids2_trim150_scaffold_147_16
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14776..15720)
DNA (945bp) protein (315aa)
Electron transfer flavoprotein alpha subunit n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3M6_9BRAD rbh
Electron transfer flavoprotein large subunit {ECO:0000313|EMBL:CEG06860.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
electron transfer flavoprotein subunit alpha (alpha-etf); K03522 electron transfer flavoprotein alpha subunit rbh
scnpilot_solids2_trim150_scaffold_147_17
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15720..16466)
DNA (747bp) protein (249aa)
Electron transfer flavoprotein alpha/beta-subunit n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3M7_9BRAD rbh
Electron transfer flavoprotein small subunit {ECO:0000313|EMBL:CEG06859.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
etfB; electron transfer flavoprotein subunit beta; K03521 electron transfer flavoprotein beta subunit rbh
scnpilot_solids2_trim150_scaffold_147_18
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16591..17163)
DNA (573bp) protein (191aa)
ATP:cob(I)alamin adenosyltransferase (EC:2.5.1.17) rbh
ATP/cobalamin adenosyltransferase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3M8_9BRAD rbh
Cob(I)yrinic acid a,c-diamide adenosyltransferase {ECO:0000313|EMBL:CEG06858.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
scnpilot_solids2_trim150_scaffold_147_19
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17337..17531)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3M9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI52559.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_147_20
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17683..18567
DNA (885bp) protein (295aa)
Ribonuclease BN n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3N0_9BRAD rbh
Ribonuclease BN {ECO:0000313|EMBL:EFI52560.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
ribonuclease BN family protein; K07058 membrane protein rbh
scnpilot_solids2_trim150_scaffold_147_21
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18500..19771)
DNA (1272bp) protein (424aa)
Histidine kinase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3N1_9BRAD rbh
Histidine kinase {ECO:0000313|EMBL:EFI52561.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
histidine kinase/response regulator protein rbh
scnpilot_solids2_trim150_scaffold_147_22
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19818..20702)
DNA (885bp) protein (295aa)
glutamyl-Q tRNA(Asp) synthetase (EC:6.1.1.-); K01894 glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] rbh
Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3N2_9BRAD rbh
Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain {ECO:0000313|EMBL:EFI52562.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
scnpilot_solids2_trim150_scaffold_147_23
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20793..21590
DNA (798bp) protein (266aa)
DNA-3-methyladenine glycosidase II; K01247 DNA-3-methyladenine glycosylase II [EC:3.2.2.21] rbh
HhH-GPD family protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3N3_9BRAD rbh
HhH-GPD family protein {ECO:0000313|EMBL:EFI52563.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
scnpilot_solids2_trim150_scaffold_147_24
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21680..22237
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NXC0_AFIFE rbh
HNH endonuclease rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS30833.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
scnpilot_solids2_trim150_scaffold_147_25
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22297..23319)
DNA (1023bp) protein (341aa)
Beta-ketoacyl-acyl-carrier-protein synthase III {ECO:0000313|EMBL:EFI52566.1}; EC=2.3.1.180 {ECO:0000313|EMBL:EFI52566.1};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
fabH2; 3-oxoacyl-[acyl-carrier-protein] synthase FabH (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] rbh
Beta-ketoacyl-acyl-carrier-protein synthase III n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3N6_9BRAD rbh
scnpilot_solids2_trim150_scaffold_147_26
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23755..24234)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3P5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG06838.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_147_27
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24408..24638
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3P6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG06837.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_147_28
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24734..25216)
DNA (483bp) protein (161aa)
Disulfide bond formation protein DsbB n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3P7_9BRAD rbh
Disulfide bond formation protein B {ECO:0000313|EMBL:CEG06836.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_147_29
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25333..25524)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WUY2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ36238.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
resolvase
scnpilot_solids2_trim150_scaffold_147_trna_1
unknown

Not on your lists

25406..25487
DNA (82bp)
transferRNA Leu
Displaying items 1-30 of 99 in total

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