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scnpilot_solids2_trim150_scaffold_89_8

Organism: SCNPILOT_SOLID2_TRIM150_Afipia_61_20

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 7311..9227

Top 3 Functional Annotations

Value Algorithm Source
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.6
  • Coverage: 638.0
  • Bit_score: 1212
  • Evalue 0.0
dxs1; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7); K01662 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] similarity KEGG
DB: KEGG
  • Identity: 92.1
  • Coverage: 636.0
  • Bit_score: 1174
  • Evalue 0.0
  • rbh
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V9C0_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 95.6
  • Coverage: 638.0
  • Bit_score: 1212
  • Evalue 0.0
  • rbh

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1917
GTGTCTCAGACCAGCACGACCCCGTTGCTCGATACCATTCCGACCCCCGACAAACTGCGCGCCCTGGCGCCCGAGCAGTTGCCGCAGGTTGCAGAGGAACTGCGCCGCGAAATGGTCGACGCCGTCTCTGTTACCGGCGGTCACCTCGGCGCCGGCCTTGGCGTGGTCGAACTGACCGTCGCCTTGCATTACGTGTTCAACACCCCCGACGACCGCATCGTCTGGGACGTCGGCCATCAGGCCTATCCGCACAAGATTCTCACCGGGCGTCGCGACCGCATCCGTACCCTGCGGCAGGGCGGCGGCCTGTCCGGTTTTCCGAAGCGCGCCGAGAGCCAATACGATGCTTTCGGCACCGCGCATTCCTCGACCTCGATTTCGGCCGGTCTCGGCATGGCGGTGGCGCGCGACCTGCAACAGGGCAACAACAACGTCATCGCCGTGATCGGTGATGGCTCAATGTCGGCGGGCATGGCCTATGAGGCGATGAACAACGCGGGCGCGCTGAACTCGCGCCTGATCGTCATCCTCAACGACAACGATATGTCGATCGCGCCGCCGGTGGGCGCGATGTCCGCCTATCTGGCGCGACTGATCTCCAGCCAGACCTATGGCACCGCGCGCGAGATCCTGAAAACCATCGCCAACCGGATGCCGAAATTCTTTCAGGATCGCACCCTGCGCGCGGAGGAATATGCGCGCGGCATGGTGGCTGGCGGCATGCTGTTCGAAGAACTCGGCCTGTTCTATGTCGGCCCGATCGACGGCCACAATCTCGACCACCTCCTGCCCGTGCTCACCAACGTGCGCGATAACGGCACCGGCCCGGTGCTCATCCATGTCGTGACCAAGAAAGGCAAGGGCTACGCGCCGGCGGAGGAATCTGACGACCGCTATCATGGCGTGGTGAAATTCGACGTCGCCACCGGCAAGCAGTTCAAGACGAAGTCGAACGCTCCTTCCTACACCTCCGTGTTCGGCAACAGCCTCGCCAAGGAAGCGCAGAAGGATGACAGGATCGTTGCCATCACCGGCGCGATGCCGGGCGGCACCGGCGTCGATATTTTTGCGAAATCGTTTCCCGAGCGCACCTTCGATGTCGGCATCGCCGAACAGCATGCGGTGACGTTCGCAGCCGGTCTTGCCGCCGAAGGCTACAAGCCGTTCTGCGCGCTGTACTCGACCTTCTTGCAGCGCGGCTACGATCAGGTGGTGCACGACGTCGCGATCCAGAACCTTCCGGTTCGCTTTGCGATCGACCGTGCGGGCCTTGTCGGCGCCGACGGCCCAACCCATGCGGGTGCGTTCGACAACACCTATCTCGGTTGCCTGCCGAACCTCGTCATCATGGCGGCAGGCGACGAAGCCGAACTCGTGCACATGGTTGCCACGCAGGTTGCGATCGACAACGCCCCGAGCGCGCTGCGCTATCCGCGCGGTGAAGGCCTCGGCGTTGAGTTGCCGGATGCCGGCGTGCCACTTGAGATCGGCAAGGGTCGAGTGCTGCGTGAAGGCTCGAAGGTCGCCCTGTTCTCGTTCGGCACAAGGCTTGGCGAGTGTCTGAAGGCCGCTGGCGAACTCGAATCACACGGCTTGTCGACGACCGTCGCCGACGCACGCTTCCTCAAGCCGCTGGACACTGACCTCACCCTGAAACTTGCGCGCTCGCATGATGTGCTGATCACGGTCGAGGAAGGCGCGATCGGCGGCTTCGGTACCCATGTCATTCAGGCGCTGGCCAATCAGGGCGCGCTCGACCGCGGCGTACGGATCCGCTCGATGGTGCTGCCCGACATCTTCATCGATCAGGACAGTCCTGCGAAGATGTACGAACAGGCGAGGCTGGACGCGAAAGCCATCGTGGCGAAGGTGTTCGAGGCGCTCGGCCCGGACGCGGCATCTACAAAGCTGGCGTAA
PROTEIN sequence
Length: 639
VSQTSTTPLLDTIPTPDKLRALAPEQLPQVAEELRREMVDAVSVTGGHLGAGLGVVELTVALHYVFNTPDDRIVWDVGHQAYPHKILTGRRDRIRTLRQGGGLSGFPKRAESQYDAFGTAHSSTSISAGLGMAVARDLQQGNNNVIAVIGDGSMSAGMAYEAMNNAGALNSRLIVILNDNDMSIAPPVGAMSAYLARLISSQTYGTAREILKTIANRMPKFFQDRTLRAEEYARGMVAGGMLFEELGLFYVGPIDGHNLDHLLPVLTNVRDNGTGPVLIHVVTKKGKGYAPAEESDDRYHGVVKFDVATGKQFKTKSNAPSYTSVFGNSLAKEAQKDDRIVAITGAMPGGTGVDIFAKSFPERTFDVGIAEQHAVTFAAGLAAEGYKPFCALYSTFLQRGYDQVVHDVAIQNLPVRFAIDRAGLVGADGPTHAGAFDNTYLGCLPNLVIMAAGDEAELVHMVATQVAIDNAPSALRYPRGEGLGVELPDAGVPLEIGKGRVLREGSKVALFSFGTRLGECLKAAGELESHGLSTTVADARFLKPLDTDLTLKLARSHDVLITVEEGAIGGFGTHVIQALANQGALDRGVRIRSMVLPDIFIDQDSPAKMYEQARLDAKAIVAKVFEALGPDAASTKLA*