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scnpilot_solids2_trim150_scaffold_89

Search features with annotation key words

Displaying items 1-30 of 138 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_89_1
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..87)
DNA (87bp) protein (29aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NE78_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS28922.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
scnpilot_solids2_trim150_scaffold_89_2
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(532..2031)
DNA (1500bp) protein (500aa)
mmsA; methylmalonate-semialdehyde dehydrogenase MmsA; K00140 malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] rbh
Methylmalonate-semialdehyde dehydrogenase (Acylating) n=1 Tax=Afipia felis ATCC 53690 RepID=K8NRT0_AFIFE rbh
Methylmalonate-semialdehyde dehydrogenase (Acylating) {ECO:0000313|EMBL:EKS28923.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
scnpilot_solids2_trim150_scaffold_89_3
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2184..3071
DNA (888bp) protein (296aa)
ModE molybdate transport repressor domain-containing protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NKF6_AFIFE rbh
ModE molybdate transport repressor domain-containing protein {ECO:0000313|EMBL:EKS28924.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
LysR family transcriptional regulator rbh
scnpilot_solids2_trim150_scaffold_89_4
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3143..4927
DNA (1785bp) protein (595aa)
mmgC; acyl-CoA dehydrogenase MmgC (EC:1.3.99.3) rbh
Acyl-CoA dehydrogenase domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V9C4_9BRAD rbh
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:EFI50762.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
scnpilot_solids2_trim150_scaffold_89_5
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5079..5825
DNA (747bp) protein (249aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V9C3_9BRAD rbh
2,3-dehydroadipyl-CoA hydratase {ECO:0000313|EMBL:CEG08833.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
enoyl-CoA hydratase/isomerase rbh
scnpilot_solids2_trim150_scaffold_89_6
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5865..6797
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NKG1_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS28929.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
histone deacetylase family protein rbh
scnpilot_solids2_trim150_scaffold_89_7
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6871..7122
DNA (252bp) protein (84aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
xseB; exodeoxyribonuclease 7 small subunit XseB (EC:3.1.11.6); K03602 exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
Exodeoxyribonuclease 7 small subunit n=1 Tax=Afipia sp. 1NLS2 RepID=D6V9C1_9BRAD
scnpilot_solids2_trim150_scaffold_89_8
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7311..9227
DNA (1917bp) protein (639aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
dxs1; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7); K01662 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] rbh
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V9C0_9BRAD rbh
scnpilot_solids2_trim150_scaffold_89_9
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9334..10065
DNA (732bp) protein (244aa)
rrmJ; ribosomal RNA large subunit methyltransferase J (EC:2.1.1.-); K06442 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] rbh
Hemolysin A n=1 Tax=Afipia sp. 1NLS2 RepID=D6V9B9_9BRAD rbh
Hemolysin A {ECO:0000313|EMBL:EFI50757.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
scnpilot_solids2_trim150_scaffold_89_10
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10065..11306
DNA (1242bp) protein (414aa)
putative RNA methyltransferase; K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] rbh
(Uracil-5)-methyltransferase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V9B8_9BRAD rbh
(Uracil-5)-methyltransferase {ECO:0000313|EMBL:EFI50756.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
scnpilot_solids2_trim150_scaffold_89_11
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11533..13215
DNA (1683bp) protein (561aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Afipia sp. 1NLS2 RepID=D6V9B7_9BRAD rbh
Methyl-accepting chemotaxis protein 3 {ECO:0000313|EMBL:CEG08839.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
putative chemotaxis sensory transducer; K03406 methyl-accepting chemotaxis protein rbh
scnpilot_solids2_trim150_scaffold_89_12
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13289..13975)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V9B6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI50754.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_89_13
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14066..15148)
DNA (1083bp) protein (361aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
aroC; chorismate synthase AroC (EC:4.2.3.5); K01736 chorismate synthase [EC:4.2.3.5] rbh
Chorismate synthase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NIP1_AFIFE rbh
scnpilot_solids2_trim150_scaffold_89_14
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15393..15992)
DNA (600bp) protein (200aa)
phosphoglycerate mutase; K15634 probable phosphoglycerate mutase [EC:5.4.2.1] rbh
Phosphoglycerate mutase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V9B4_9BRAD rbh
Glucosyl-3-phosphoglycerate phosphatase {ECO:0000313|EMBL:CEG08842.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
scnpilot_solids2_trim150_scaffold_89_15
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16142..16960)
DNA (819bp) protein (273aa)
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
enoyl-ACP reductase (EC:1.3.1.9); K00208 enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9] rbh
Enoyl-[acyl-carrier-protein] reductase [NADH] n=1 Tax=Afipia sp. 1NLS2 RepID=D6V9B3_9BRAD rbh
scnpilot_solids2_trim150_scaffold_89_16
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17173..17658
DNA (486bp) protein (162aa)
RNA polymerase sigma factor n=1 Tax=Afipia sp. 1NLS2 RepID=D6V9B2_9BRAD
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
putative RNA polymerase sigma factor protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily
scnpilot_solids2_trim150_scaffold_89_17
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17686..18459
DNA (774bp) protein (258aa)
Putative transmembrane anti-sigma factor n=1 Tax=Afipia sp. 1NLS2 RepID=D6V9B1_9BRAD rbh
Putative transmembrane anti-sigma factor {ECO:0000313|EMBL:EFI50749.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_89_18
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18624..18974)
DNA (351bp) protein (117aa)
PRC-barrel domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V9B0_9BRAD
PRC-barrel domain protein {ECO:0000313|EMBL:EFI50748.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_89_19
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19117..19416)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NE93_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS28942.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_89_20
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19502..20479)
DNA (978bp) protein (326aa)
Chaperone DnaJ domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V9A7_9BRAD rbh
Chaperone DnaJ domain protein {ECO:0000313|EMBL:EFI50745.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
dnaJ2; chaperone, heat shock protein Hsp40 rbh
scnpilot_solids2_trim150_scaffold_89_21
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20563..21003)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V9A6_9BRAD
Surface antigen {ECO:0000313|EMBL:CEG08850.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_89_22
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21244..21744
DNA (501bp) protein (167aa)
Pyridoxal 5'-phosphate synthase {ECO:0000256|SAAS:SAAS00025317}; EC=1.4.3.5 {ECO:0000256|SAAS:SAAS00025317};; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
pdxH; pyridoxine/pyridoxamine 5'-phosphate oxidase PdxH (EC:1.4.3.5); K00275 pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] rbh
Pyridoxal 5'-phosphate synthase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V9A5_9BRAD rbh
scnpilot_solids2_trim150_scaffold_89_23
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21789..22544
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NIQ0_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS28946.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
short-chain dehydrogenase/reductase SDR rbh
scnpilot_solids2_trim150_scaffold_89_24
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22605..25262
DNA (2658bp) protein (886aa)
putative ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1] rbh
DNA ligase D n=1 Tax=Afipia sp. 1NLS2 RepID=D6V9A3_9BRAD rbh
DNA ligase D {ECO:0000313|EMBL:EFI50741.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
scnpilot_solids2_trim150_scaffold_89_25
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25401..25718)
DNA (318bp) protein (106aa)
CutA1 divalent ion tolerance protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V9A2_9BRAD
CutA1 divalent ion tolerance protein {ECO:0000313|EMBL:EFI50740.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
cutA; divalent ion tolerance protein CutA; K03926 periplasmic divalent cation tolerance protein
scnpilot_solids2_trim150_scaffold_89_26
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25738..26715)
DNA (978bp) protein (326aa)
Mg2 transporter protein CorA family protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V9A1_9BRAD rbh
Magnesium transport protein CorA {ECO:0000313|EMBL:CEG08855.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
corA; magnesium transport protein CorA; K03284 magnesium transporter rbh
scnpilot_solids2_trim150_scaffold_89_27
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27022..27696
DNA (675bp) protein (225aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V9A0_9BRAD rbh
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:EFI50738.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
putative ErfK/YbiS/YcfS/YnhG family protein rbh
scnpilot_solids2_trim150_scaffold_89_28
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27847..28395)
DNA (549bp) protein (183aa)
Extensin family protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V999_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CEG08857.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_89_29
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28881..29609
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V998_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EFI50736.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein; K07090 rbh
scnpilot_solids2_trim150_scaffold_89_30
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29695..30546
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V997_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EFI50735.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein rbh
Displaying items 1-30 of 138 in total

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