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scnpilot_solids2_trim150_scaffold_210_30

Organism: SCNPILOT_SOLID2_TRIM150_Afipia_61_20

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 39709..40041

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S10 n=1 Tax=Afipia felis ATCC 53690 RepID=K8NFL9_AFIFE similarity UNIREF
DB: UNIREF100
  • Identity: 98.2
  • Coverage: 110.0
  • Bit_score: 216
  • Evalue 1.60e-53
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 110.0
  • Bit_score: 218
  • Evalue 3.50e-54
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 102.0
  • Bit_score: 203
  • Evalue 2.60e-50

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 333
GTGACGGGCAAGAAAGAAACGGCAATGAACGGCCAGAATATCCGCATACGTCTCAAGGCGTTCGACCATCGGGTTCTCGATACGTCGACCCGCGAGATCGTAAACACGGCAAAACGTACCGGTGCTCAGGTTCGCGGACCGATTCCGCTGCCGACCCGCATCGAGAAGTTCACCGTGAACCGTTCGCCTCACGTCGATAAGAAAAGCCGCGAGCAGTTCGAGATGCGCACCCACAAGCGCCTCCTCGATATCGTCGATCCGACACCGCAGACGGTCGATGCTCTGATGAAGCTCGACCTCGCCGCTGGCGTCGATGTCGAGATCAAGCTCTGA
PROTEIN sequence
Length: 111
VTGKKETAMNGQNIRIRLKAFDHRVLDTSTREIVNTAKRTGAQVRGPIPLPTRIEKFTVNRSPHVDKKSREQFEMRTHKRLLDIVDPTPQTVDALMKLDLAAGVDVEIKL*