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scnpilot_solids2_trim150_scaffold_270_5

Organism: SCNPILOT_SOLID2_TRIM150_Afipia_61_20

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 2770..3516

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, GntR family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1R3_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 95.6
  • Coverage: 248.0
  • Bit_score: 455
  • Evalue 3.60e-125
  • rbh
L-lactate utilization operon repressor {ECO:0000313|EMBL:CEG09981.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.6
  • Coverage: 248.0
  • Bit_score: 455
  • Evalue 5.00e-125
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 39.5
  • Coverage: 238.0
  • Bit_score: 177
  • Evalue 5.90e-42

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 747
ATGGGACATGTTGTTTCTCTTCCGGCTGAGCCGCCCAAAAAACCAAAGACCAGCGTACGGCAAAGTGACATCGCCTTCGACGCCATCCATAAGGCGATCGTGCGCTGCGAACTGATGCCGGGATCAATCGTCACCGAGGTCGATCTCGCCAATCAATTCAATTTCGGCAGGGCTGCGGCCCGGGCCGCTGTCGATCGTCTGTCCCTGATCGGCCTGCTCCAGCCGGTGCGCCGTCAAGGCTACCGCGTCAAGCCGATCACGCTGCGCGACCTGAACGATCTGTTCCAGCTTCGGGAGATCATCGAAGTGGCTTGCGTCAGGCTTGCCGCCGGGCGCGTCGATTCCGCTGACCTTCATCGCCTGGACCGGCTGTGCCGCGCCGACTACCAGCCCGGCAACAAGGAAAGCGAAGCAAACTTCCTGCAACGGAACAGCGACTTTCACCTGAGCATCGCGGCTGCCACCGGCAATGACCGGCTGGTCTCCGTTCTGAAACAGACGCTGATGGAGCTTGAGCGGATGTTTCACTTTGGCCTGTCGCTGCGCGACCGCGGCAGTGAAATGCATTCCGAGCATAAATCGATCATTGATGCGCTGGCGGAAGGTGACGCCGAAACCGCAGAACGGGTCACTGTTGATCAGGTGCGCTCCTCTCGCGCGATGGTTCTGGACGCCCTGCTGTCGAGCACATCGCTGCTCGACGTGAAGATCGGCGTCACCCACACTCCCGAAAGCTCGCTTGCCTAG
PROTEIN sequence
Length: 249
MGHVVSLPAEPPKKPKTSVRQSDIAFDAIHKAIVRCELMPGSIVTEVDLANQFNFGRAAARAAVDRLSLIGLLQPVRRQGYRVKPITLRDLNDLFQLREIIEVACVRLAAGRVDSADLHRLDRLCRADYQPGNKESEANFLQRNSDFHLSIAAATGNDRLVSVLKQTLMELERMFHFGLSLRDRGSEMHSEHKSIIDALAEGDAETAERVTVDQVRSSRAMVLDALLSSTSLLDVKIGVTHTPESSLA*