ggKbase home page

scnpilot_solids2_trim150_scaffold_270_7

Organism: SCNPILOT_SOLID2_TRIM150_Afipia_61_20

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 5036..5944

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1R1_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 95.4
  • Coverage: 302.0
  • Bit_score: 567
  • Evalue 6.00e-159
  • rbh
HTH-type transcriptional activator CmpR {ECO:0000313|EMBL:CEG09983.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.4
  • Coverage: 302.0
  • Bit_score: 567
  • Evalue 8.50e-159
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 57.5
  • Coverage: 301.0
  • Bit_score: 317
  • Evalue 5.80e-84
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 909
ATGGATTTCCGCCAGATCAGCTATTTCGTTGCGCTGTATGAGGAAGGCAGCGTGACGCGCGCCGCGCAACGGCTCAATGTAGTTCAGCCGGCCGTGTCGATGCAGATCGCCAAGCTGGAGCGCGATCTCAACCACAAGCTGTTCGAGCGTCTGTCCAAGGCAATGGTCCCGACGGTCGCCGGCCGCACGCTCTACCGGCTGGTTGTCCCGGTGCTGCACAGCCTGACGCTGGCGCGCGGACATATGGCGAAGCTGTCCGGCGTGACATCGGGTCGCATCACGATCGGCATACTGTCCTCGCTCGCCGTCAGTTTCGTGCCTGACATGCTGATCGCCTTTGCGCACGATTACCCCGAGGTCGAGGTCGTCATCATCGACGGCTACAGCTCAACCTTTATCGATCTGGTGAACCAGGGCGCGCTGGATTTCGCGGTGATCAACAAACCCCCGCGGCGGCTGGGGTTGACCGTCGAGCCGCTGGTCGACGAGCGGATGGTTTACGTAACCGCCGCCGCCCGCAAGCAGTCCAAGGGGCCGATCGGCATTACCGATCTGCAGCAGGCCAAATTGATCCTGCCCTCGCAGCGGCACGGCCTGCGGGCCGAACTGGAGCGGCATTTCGGGGCGCGTGACGTGTCCCTCAACCTGCAGCTCGAAATGGATTCGATCCAGGGTATCTGCGAGGTCGTCGCGCGCAGCGACTGGGCGACGATCCTGCCGAGCCTCGGGGTAAGCCTTGGCATCGCCGATGGCCGTCTTGCGGCCCGGATGATCAATCCACCGATGACCCGCCAGCTTGCGATCATTCACCATCCCCGCCACCCTTTAACGCCGGCGGCCGATGCGTTCCTCGATCGGTTTCGCGACCACGTCGGCAAGGCCGTTGCGCGCGGGGATCACGGCGGATGA
PROTEIN sequence
Length: 303
MDFRQISYFVALYEEGSVTRAAQRLNVVQPAVSMQIAKLERDLNHKLFERLSKAMVPTVAGRTLYRLVVPVLHSLTLARGHMAKLSGVTSGRITIGILSSLAVSFVPDMLIAFAHDYPEVEVVIIDGYSSTFIDLVNQGALDFAVINKPPRRLGLTVEPLVDERMVYVTAAARKQSKGPIGITDLQQAKLILPSQRHGLRAELERHFGARDVSLNLQLEMDSIQGICEVVARSDWATILPSLGVSLGIADGRLAARMINPPMTRQLAIIHHPRHPLTPAADAFLDRFRDHVGKAVARGDHGG*