ggKbase home page

scnpilot_solids2_trim150_scaffold_65_6

Organism: SCNPILOT_SOLID2_TRIM150_Afipia_61_20

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(5198..6379)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.9
  • Coverage: 393.0
  • Bit_score: 759
  • Evalue 2.00e-216
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.1.1.61); K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] similarity KEGG
DB: KEGG
  • Identity: 89.6
  • Coverage: 393.0
  • Bit_score: 716
  • Evalue 5.60e-204
  • rbh
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2W5_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 95.9
  • Coverage: 393.0
  • Bit_score: 759
  • Evalue 1.40e-216
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1182
ATGCTCAACAGTCTCGACTTCGAAGGACCGCCGTCTGGCACGCGCGTAGTCGTTGCCATGTCCGGTGGCGTCGACTCCTCGACCACAGCCGCGTTGCTGAAGGCCGAGGGCTACGACGTTATCGGTATCACGCTGCAACTTTACGATCACGGCGCCGCAACTCACCGTAAAGGTGCCTGCTGCGCAGGACAGGATATTCACGACGCGCGCGACGTCGCCGAACGCATCGGCATTCCGCATTATGTGCTCGACTATGAGAGCCGCTTCCGTGAAGCGGTAATCGACCGCTTCGCGGAAAGCTACGCCCTCGGCGAAACGCCGGTGCCGTGTATCGAGTGCAATCGTTCGGTCAAATTCCGCGATCTGCTCACCACCGCGCGCGAACTCGGCGCCAAGGCGCTGGCCACCGGCCATTATGTCGCTTCGCGCCGGCAGCCGGACGGCTCGCGCGCCATGGTCTGCGCTGCCGACGCCGACCGCGACCAGAGTTATTTCCTGTTTGCGACGACGCAGAACCAGCTCAACGATCTACGCTTCCCACTCGGCGACATGACCAAGACCCAGACCCGCGAATTGGCGCGCCGTTTCGGTTTACCAGTTGCCGAGAAACACGACAGTCAGGACATCTGCTTTGTGCCGACCGGCCGCTATACCGACGTGATCGAGCGCATGAAGCCGAATGCGCTGCAGCCAGGAGACATCGTCGATCTGCGTGGCCGCGTTCTTGGCCATCATCCGGGCATCGTGAACTTCACGATCGGCCAGCGACGCGGCATTGGCATTGCAGCCGCCGAACCGCTTTATGTCGTGGCTCTCGACGCGGCATCGCGCAGGGTCATTGTCGGCCCGCGCGCCGCACTGCGCAAAAGCGTTATTACCCTGCGCGATATCAACTGGATCGGAGACGGCTCATTTGAGCACGCGGCAACCGAAGGCCGCGATTTCTACATCAAGGTGAGATCAACTCGCCTGCCGCAGCCGGCCCATCTGCGGATGAATGGTGACCATTGTGAAGTCGAACTTCTCGCCGGCGAGGAAGGCATCTCGCCGGGACAGGCTTGTGTGTTCTACGATGCGCCGGTAGGACAGGCGCGCGTGCTCGGCGGCGGGTTCATCACGCACGCGTTCAATCAAGGCGACAGAACAGATTTTCAGCACATTGCGGCCTCCGCCGCGATCTAG
PROTEIN sequence
Length: 394
MLNSLDFEGPPSGTRVVVAMSGGVDSSTTAALLKAEGYDVIGITLQLYDHGAATHRKGACCAGQDIHDARDVAERIGIPHYVLDYESRFREAVIDRFAESYALGETPVPCIECNRSVKFRDLLTTARELGAKALATGHYVASRRQPDGSRAMVCAADADRDQSYFLFATTQNQLNDLRFPLGDMTKTQTRELARRFGLPVAEKHDSQDICFVPTGRYTDVIERMKPNALQPGDIVDLRGRVLGHHPGIVNFTIGQRRGIGIAAAEPLYVVALDAASRRVIVGPRAALRKSVITLRDINWIGDGSFEHAATEGRDFYIKVRSTRLPQPAHLRMNGDHCEVELLAGEEGISPGQACVFYDAPVGQARVLGGGFITHAFNQGDRTDFQHIAASAAI*