ggKbase home page

scnpilot_solids2_trim150_scaffold_65_23

Organism: SCNPILOT_SOLID2_TRIM150_Afipia_61_20

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(25105..25617)

Top 3 Functional Annotations

Value Algorithm Source
Lytic transglycosylase catalytic n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2U8_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 94.2
  • Coverage: 173.0
  • Bit_score: 326
  • Evalue 1.70e-86
  • rbh
Internal virion protein D {ECO:0000313|EMBL:CEG07243.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.2
  • Coverage: 173.0
  • Bit_score: 326
  • Evalue 2.40e-86
putative transglycosylase similarity KEGG
DB: KEGG
  • Identity: 78.6
  • Coverage: 168.0
  • Bit_score: 254
  • Evalue 2.00e-65

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 513
ATGAAAAGATTTGCGCTCGCCGCAGTTGCGGCGTTGTCAGCGATTCCGGTTGCTCATGCCGAAGGTGAATCCTATCGCGCTATGGTGGAAAGCCATGCCGCCGCCGAAGGCGTTCCAGCAGAACTCGTACATCGGGTCATCATGCGCGAAAGTCGATATAATCCTCGCGCTGTTCATGCGGGCAATTATGGCATGATGCAGATCAAGCTGCAGACCGCACGCGGTCTTGGCTATACCGGAACGGCACAGGGCCTGCTCGACCCTGAAACGAACCTCACCTATGCGGTGAAGTATCTCGCCGGCGCCTATCGTGCCGCGCATGGCAACCACAATCGTGCCGTCGCCTATTATGCCGGCGGATACTATCATGCCGCCAAACGTCAGCGTTCGATGGAAGCGAATGCAGCGATGCTACCGAATTCCGGGCTTGCGCCCGCCCTGGACATCACACCGGCCCAGTTTGCCACACCGGCGCGCTATGTTCGCCAGCGACATCATCGCCACCATCGCTGA
PROTEIN sequence
Length: 171
MKRFALAAVAALSAIPVAHAEGESYRAMVESHAAAEGVPAELVHRVIMRESRYNPRAVHAGNYGMMQIKLQTARGLGYTGTAQGLLDPETNLTYAVKYLAGAYRAAHGNHNRAVAYYAGGYYHAAKRQRSMEANAAMLPNSGLAPALDITPAQFATPARYVRQRHHRHHR*