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scnpilot_solids2_trim150_scaffold_65_25

Organism: SCNPILOT_SOLID2_TRIM150_Afipia_61_20

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 27486..28688

Top 3 Functional Annotations

Value Algorithm Source
Extensin family protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2U6_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 93.5
  • Coverage: 402.0
  • Bit_score: 764
  • Evalue 5.80e-218
  • rbh
Extensin family protein {ECO:0000313|EMBL:EFI52276.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.5
  • Coverage: 402.0
  • Bit_score: 764
  • Evalue 8.20e-218
extensin family protein similarity KEGG
DB: KEGG
  • Identity: 77.6
  • Coverage: 406.0
  • Bit_score: 633
  • Evalue 4.90e-179
  • rbh

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1203
ATGGCGCGTGGAGTGAGTTTGTATCTCGTCGGCTCCCTTGCCCTTGTCTCCCTGGCGGGTTGCGGTCGTGGCTTTTTTCAAACCGCAGAGCGTGAACCCTGGCGAGCCGAGGCGGAACAGGCATGCCTGAAAACGGGGGAGGTCAAGGAAAGCGCCGAGGTCGTGCGCATCAGTCCAATTTCCGGGCCGGGTGTTTGTGGCGCGGAATTCCCGCTGAAGGTCAGCGTGCTTGGTGAAAGCAACAGTTCACTCGGTTATGCCGACGATCTGCGGCCGCCGGGTTCAATCGCAGGCCAGCCGCGTTGGCCGGTTGCCCAGCCATCCTATCGGCAGCCTTCTTCGTATCAGCGCCCGGCCTATTCAGCCGCCCAGGGCGGCTATATGCCGTCCGGTGAGCCGGTGCCTTTGAATATTCAGGCAACATTACCGGCTGATGGTGAAGACGACATGGCACACGAAGAAGCCCTGCAAGGCCGCCCGGGCCATTCGGCGACGCCTTATCAAAGCACGCCCGATCGAAGTGCGCCGTATCAGCAGGGTGCACAGCAACCGGCGCACTATTCGCAGCAGCGGCTTGGCCCTGTCGGAAATCCGGTGTCGTCTTTCGGGCCTGTCACTTTGAAGCCGACTGCGACGCTTGCATGTCCCATTGTTTCCGCGCTCGATCGCTGGATTACAGAAGCTATCCAGCCTGCTGCAGTGCGCTGGTTCGGGGCGCGCGTCGTGGAGATCAAGCAGATCTCGGCCTATTCGTGCCGCGGCATGAACGGCAATCCCAATGCGCATATTTCAGAACATGCATTCGGCAACGCTCTCGATGTTGCGGGATTCACGCTGGCCGATGGGCGCTACATCTCGGTGCAACACGGCTGGAAGGGGTTGCCGGAAGAGCAGGGCTTCTTGCGTGATGTTGAGGCTGCGGCCTGTCAGCGGTTCAACACCGTGCTCGCGCCTGGTGCCAACGTCTATCACTACAATCACATTCACGTCGACCTGATGCGCCGCGCGAGCGGACGCATCATCTGCAAGCCAGCGGCCGTGTCGGGCGAGGAGATCGCGGCGCGCGCGGGTGGCCGCAGCTATGCCAATCGGGATACCGGAGTCACGGGATCGATCGGGCAGAAGGTGCGCCGTGCGTTCGCCCATGGACCGCTGTCGAAAGAGGATCGCGACTCGATCGAGGATGAAAGCCGCGTTCGATAG
PROTEIN sequence
Length: 401
MARGVSLYLVGSLALVSLAGCGRGFFQTAEREPWRAEAEQACLKTGEVKESAEVVRISPISGPGVCGAEFPLKVSVLGESNSSLGYADDLRPPGSIAGQPRWPVAQPSYRQPSSYQRPAYSAAQGGYMPSGEPVPLNIQATLPADGEDDMAHEEALQGRPGHSATPYQSTPDRSAPYQQGAQQPAHYSQQRLGPVGNPVSSFGPVTLKPTATLACPIVSALDRWITEAIQPAAVRWFGARVVEIKQISAYSCRGMNGNPNAHISEHAFGNALDVAGFTLADGRYISVQHGWKGLPEEQGFLRDVEAAACQRFNTVLAPGANVYHYNHIHVDLMRRASGRIICKPAAVSGEEIAARAGGRSYANRDTGVTGSIGQKVRRAFAHGPLSKEDRDSIEDESRVR*