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scnpilot_solids2_trim150_scaffold_65_28

Organism: SCNPILOT_SOLID2_TRIM150_Afipia_61_20

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 29765..31003

Top 3 Functional Annotations

Value Algorithm Source
Secretion protein HlyD family protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2U3_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 91.3
  • Coverage: 412.0
  • Bit_score: 717
  • Evalue 8.40e-204
  • rbh
Multidrug resistance protein MdtN {ECO:0000313|EMBL:CEG07248.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.5
  • Coverage: 412.0
  • Bit_score: 718
  • Evalue 4.00e-204
secretion protein HlyD family protein; K03543 multidrug resistance protein A similarity KEGG
DB: KEGG
  • Identity: 80.5
  • Coverage: 416.0
  • Bit_score: 631
  • Evalue 1.50e-178
  • rbh

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1239
ATGGCCCCTCGTGAGCAATCTGCTGTCCGCAGGGCTGACATCGATACAGATGCAGGCGCAACGTCCGCCTCCAATTCTTCGGCCCGTCCCCGGCTGGAAGATGTGACCGCACGCCGCACAACGGAAAGCCCCGCCACCGCAGCCGATGCCCCGGCTGCAGCGGGGTCCCGCTGGGCGCGGCTTGGCCGCCGCCAGAAAATTTTCGCAGGACTAGGAGCGGTAGCCGCGATCGCACTGGCGGTGTTCGGCACCTATTATTTCATGGTCGGCCGCTTCATTGTTTCGACCGATGACGCCTATGTCCGCGCCAACAACACGATGATTGGCGCGCGCGCATCAGGCTATCTTGCGAAGATTGCGGTTAGCGACAACACCGAGGTGAAGGCGGGCGATCTCTTGTTTCAGATCGACGACGGCGATTACATGATCGCAGTCGATAACGCCCGTGCCAAGATCGCGACACAGGAAGCCACCATCCAGCGCATCGGCCGTCAGGCGAAAGCGCAAGAAAGTGCGGTCGAGCAGGCGCAAGCGCAACTCGAATCCGCGCGTGCCGCCGCCAAGCGTGCGGAAGCCGATTTCGTTCGCCAGAGCCAGTTAAGCGAGAAGGGCTTTGCCTCGAAGGCGATCTTCGATCAATCGCAGGCGACGCGCGATCAGAGCAATGCGTCGGTGCAGGGAGCCCAGGCCAATCTCGACGCCGCGCAGGCGCAGATCGATGTCATCAAGGCACAGCAGGCTGAAGCCAAAGGGCAGCTTGGAGAACTGAAGACCGCGCTGGCCAAGGCCGAGCGCGATCTGTCCTTTACCACCATCCGTGCGCCGATCGACGGTGTGTTCTCCAATCGCCTTGTCAATGAAGGGGATAATATTTCAGTGGGCCAGCGCCTCGCCAATGTTGTTCCGCTGGACGAGGTGTTCATCGATGCCAATTTCAAGGAAACCCAACTCGCGCGCATACGTCCCGGCCAGCCGGTCTACATCAGCGTCGACGCGATGAAGGGGAGCGAAATCGTCGGTGTCGTCGAGAGCCTGTCGCCCGCGTCGGGCTCGGTGTTCACGCTGCTGCCGCCGGACAACGCCACCGGCAACTTCACCAAGATCGTGCAGCGCCTGCCGGTTCGCGTACGCGTGCCGAAAGCCGTTGCGCGTGAAAACCTGCTACGTGCCGGCATGTCTGTCGAGGTCGAAGTCGATACACGGAAGTCCGCCAGACAAGCTCTTGCCAGAGCAGAGTAG
PROTEIN sequence
Length: 413
MAPREQSAVRRADIDTDAGATSASNSSARPRLEDVTARRTTESPATAADAPAAAGSRWARLGRRQKIFAGLGAVAAIALAVFGTYYFMVGRFIVSTDDAYVRANNTMIGARASGYLAKIAVSDNTEVKAGDLLFQIDDGDYMIAVDNARAKIATQEATIQRIGRQAKAQESAVEQAQAQLESARAAAKRAEADFVRQSQLSEKGFASKAIFDQSQATRDQSNASVQGAQANLDAAQAQIDVIKAQQAEAKGQLGELKTALAKAERDLSFTTIRAPIDGVFSNRLVNEGDNISVGQRLANVVPLDEVFIDANFKETQLARIRPGQPVYISVDAMKGSEIVGVVESLSPASGSVFTLLPPDNATGNFTKIVQRLPVRVRVPKAVARENLLRAGMSVEVEVDTRKSARQALARAE*