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scnpilot_solids2_trim150_scaffold_115_30

Organism: SCNPILOT_SOLID2_TRIM150_Afipia_61_20

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 28489..29601

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.6
  • Coverage: 370.0
  • Bit_score: 710
  • Evalue 9.90e-202
leuB; 3-isopropylmalate dehydrogenase (EC:1.1.1.85); K00052 3-isopropylmalate dehydrogenase [EC:1.1.1.85] similarity KEGG
DB: KEGG
  • Identity: 91.9
  • Coverage: 370.0
  • Bit_score: 677
  • Evalue 2.10e-192
  • rbh
3-isopropylmalate dehydrogenase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V161_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 97.6
  • Coverage: 370.0
  • Bit_score: 710
  • Evalue 7.10e-202
  • rbh

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1113
ATGGCACCGCACAAATTATTGCTTCTCCCCGGCGACGGCATCGGCCCCGAGGTGATGGGAGAGGTGAAGCGCCTGATCGACTGGCTGAACGCGCAAGGCATCGCCAGCTTTGAAACCGAAACCGGTCTCGTCGGCGGGTGCGCCTATGACGCCGACAAGGTTGCGATCACCGACGCCACGGTGGCGAAGGCGAAGGCGGCGGACGCCATTCTGCTCGGCGCGGTCGGTGGCCCGAAATGGGACCCGGTGCCGTTCGATGTGCGCCCCGAAGCAGGGCTGCTGCGGTTGCGCAAGGATCTCGAACTGTTCGCCAACCTGCGTCCGGCGATCTGCTATCCGGCGCTCGCCGATTCCTCGAGCCTCAAGCGCGAGATCGTCGAAGGCCTCGACATGATGATCGTGCGCGAGCTTACCGGCGGTGTCTATTTCGGCGAGCCGAAGGAGATCACCGACCTCGGTGGCGGCAAGAAGCGCGCGGTCGACACGCAGGTCTACGAGACCTACGAGATCGAGCGCATCGCCGCTGTCGCCTTCGACCTTGCGCGCAAGCGCCGCAACAAGGTGACCTCGATGGAAAAGCGCAACGTCATGAAGAGCGGCCTGCTCTGGAACGAAGTCGTGACCCGCGTGCATGCCGAAAAGTACAGGGACGTGCAGCTCGAGCACCAGCTCGCCGATTCCGGCGGCATGCAGCTCGTGCGCAATCCCAAGCAGTTCGATGTCATCGTCACCGACAATCTGTTCGGCGATGTGCTGTCCGACATCGCCGCGATGCTGACCGGCTCGCTCGGCATGCTGCCGTCGGCCTCGCTCGGCGCGGTCGACGCCAGGACCGGCAAACGCAAGGCGTTGTACGAGCCGGTGCATGGTTCCGCGCCCGACATCGCCGGCAAGGGCCTCGCCAATCCGCTGGCGATGCTGGCGTCATTCGGCATGGCGCTGCGCTATTCGTTCGACATGGGCAAACTCGCCGACACCATCGACAAGGCGATCGCCAACGTGCTCGACAAGGGCATCCGTACCGGCGACATCGCTGCTGCCGGCGCGAAGGGCGTCTCCACCTCGCAGATGGGCGAGGCGGTGTTGAAGGAAGTGCAGGCGCTGCACGGTTGA
PROTEIN sequence
Length: 371
MAPHKLLLLPGDGIGPEVMGEVKRLIDWLNAQGIASFETETGLVGGCAYDADKVAITDATVAKAKAADAILLGAVGGPKWDPVPFDVRPEAGLLRLRKDLELFANLRPAICYPALADSSSLKREIVEGLDMMIVRELTGGVYFGEPKEITDLGGGKKRAVDTQVYETYEIERIAAVAFDLARKRRNKVTSMEKRNVMKSGLLWNEVVTRVHAEKYRDVQLEHQLADSGGMQLVRNPKQFDVIVTDNLFGDVLSDIAAMLTGSLGMLPSASLGAVDARTGKRKALYEPVHGSAPDIAGKGLANPLAMLASFGMALRYSFDMGKLADTIDKAIANVLDKGIRTGDIAAAGAKGVSTSQMGEAVLKEVQALHG*