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scnpilot_solids2_trim150_scaffold_115_35

Organism: SCNPILOT_SOLID2_TRIM150_Afipia_61_20

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(33399..34004)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 201.0
  • Bit_score: 401
  • Evalue 9.10e-109
leuD; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33); K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] similarity KEGG
DB: KEGG
  • Identity: 94.0
  • Coverage: 201.0
  • Bit_score: 391
  • Evalue 1.20e-106
  • rbh
3-isopropylmalate dehydratase small subunit n=1 Tax=Afipia felis ATCC 53690 RepID=K8NJ90_AFIFE similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 201.0
  • Bit_score: 401
  • Evalue 6.50e-109
  • rbh

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 606
ATGGAAAAATTCACTGTTCTGAGCAGCGTGGCCGCGCCGATGAAGATCATCAATGTCGACACCGACATGATCATCCCCAAGCAGTACCTCAAGACCATCAAGCGGACCGGGCTCGGCAAGGGCCTGTTCTCGGAGCAGCGCTACAACGACGACGGCAGCGAGAACCCGGATTTCGTGTTGAACAAGCCGGCCTATCGCCACGCCCAGATTCTCGTCGCGGGTGACAATTTCGGCTGCGGATCGAGCCGCGAGCATGCGCCCTGGGCATTGGCCGATTTCGGCATTCGCTGCGTAATCTCAACCTCGTTCGGCGATATCTTCTACAACAACTCGTTCAAGAACGGCATGCTGCCGATCCGCGTCACCCACGAGCAGTTGGAGAAGCTGTTCGACGATGCCGAGCGCGGCGCCAACGCCACGCTGACGATCGACCTCGAGAAGCAGGAAATTCGTGGCCCCGACGGCGGCGTGATCCATTTCGAGATCGACCCGTTCCGCAAGCACTGCCTGCTCAACGGTCTCGACGACATCGGCCTGACGATGCAGAAGAAGGCTTCGATCGACAGCTTCGAAGCCCGCGAGAAGGTCGCGCACCCTTGGCTGTAG
PROTEIN sequence
Length: 202
MEKFTVLSSVAAPMKIINVDTDMIIPKQYLKTIKRTGLGKGLFSEQRYNDDGSENPDFVLNKPAYRHAQILVAGDNFGCGSSREHAPWALADFGIRCVISTSFGDIFYNNSFKNGMLPIRVTHEQLEKLFDDAERGANATLTIDLEKQEIRGPDGGVIHFEIDPFRKHCLLNGLDDIGLTMQKKASIDSFEAREKVAHPWL*