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scnpilot_solids2_trim150_scaffold_3095

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3095_1
Mycobacterium xenopi, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(4..186)
DNA (183bp) protein (61aa)
Uncharacterized protein {ECO:0000313|EMBL:EUA17416.1}; TaxID=1299333 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium xenopi 3993.;"
scnpilot_solids2_trim150_scaffold_3095_2
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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342..3434
DNA (3093bp) protein (1031aa)
TrwC relaxase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XHE2_NAKMY rbh
TrwC relaxase rbh
TrwC relaxase {ECO:0000313|EMBL:ACV78348.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_3095_3
unknown

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3431..3709
DNA (279bp) protein (93aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_3095_4
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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3667..4419
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) RepID=C8WPQ2_EGGLE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV56996.1}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
scnpilot_solids2_trim150_scaffold_3095_5
Mycobacterium sp. TKK-01-0059, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4406..5347
DNA (942bp) protein (314aa)
Uncharacterized protein n=2 Tax=Mycobacterium RepID=S4ZK14_9MYCO rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:KEF99678.1}; TaxID=1324269 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium sp. TKK-01-0059.;"
scnpilot_solids2_trim150_scaffold_3095_6
unknown

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comp(6084..7040)
DNA (957bp) protein (319aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_3095_7
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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7998..8375
DNA (378bp) protein (126aa)
luciferase n=1 Tax=Arthrobacter sp. PAO19 RepID=UPI0003B3F244
luciferase-like protein
Luciferase {ECO:0000313|EMBL:KHD77872.1}; TaxID=1869 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
scnpilot_solids2_trim150_scaffold_3095_8
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8372..9079
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037793E5
Putative NADP oxidoreductase {ECO:0000313|EMBL:CCH19593.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
coenzyme F420-dependent NADP oxidoreductase; K06988
scnpilot_solids2_trim150_scaffold_3095_9
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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9082..10149
DNA (1068bp) protein (356aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000376F5FB
Contig_7, whole genome shotgun sequence {ECO:0000313|EMBL:KIP94229.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase rbh
scnpilot_solids2_trim150_scaffold_3095_10
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10139..10927)
DNA (789bp) protein (263aa)
N-dimethylarginine dimethylaminohydrolase; K01482 dimethylargininase [EC:3.5.3.18] rbh
N(G),N(G)-dimethylarginine dimethylaminohydrolase n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UW68_9ACTO rbh
N(G),N(G)-dimethylarginine dimethylaminohydrolase {ECO:0000313|EMBL:EGD42704.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
scnpilot_solids2_trim150_scaffold_3095_11
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11057..12037)
DNA (981bp) protein (327aa)
Probable DNA repair protein Namu_0127 n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XIX4_NAKMY
Ku protein; K10979 DNA end-binding protein Ku
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_3095_12
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12130..13398
DNA (1269bp) protein (423aa)
ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1] rbh
DNA polymerase LigD, polymerase domain protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XIX5_NAKMY rbh
DNA polymerase LigD, polymerase domain protein {ECO:0000313|EMBL:ACV76562.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Displaying 12 items

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