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scnpilot_solids2_trim150_scaffold_2714

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2714_1
unknown

Not on your lists

comp(1..201)
DNA (201bp) protein (67aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2714_2
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(586..1314)
DNA (729bp) protein (243aa)
SOS-response transcriptional repressor LexA (EC:3.4.21.88); K01356 repressor LexA [EC:3.4.21.88]
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992};; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
LexA repressor n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XH40_NAKMY
scnpilot_solids2_trim150_scaffold_2714_3
unknown

Not on your lists

1596..2138
DNA (543bp) protein (181aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2714_4
Mycobacterium tuberculosis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2386..2865
DNA (480bp) protein (160aa)
Transcriptional repressor NrdR n=1 Tax=Mycobacterium tuberculosis CTRI-2 RepID=G2N1A6_MYCTU
nrdR; transcriptional regulator NrdR; K07738 transcriptional repressor NrdR
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=1773 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium tuberculosis.;"
scnpilot_solids2_trim150_scaffold_2714_5
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2950..5937
DNA (2988bp) protein (996aa)
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent {ECO:0000313|EMBL:ACV80268.1}; EC=1.17.4.1 {ECO:0000313|EMBL:ACV80268.1};; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
vitamin B12-dependent ribonucleotide reductase (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XH37_NAKMY
scnpilot_solids2_trim150_scaffold_2714_6
unknown

Not on your lists

comp(6013..6240)
DNA (228bp) protein (76aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2714_7
unknown

Not on your lists

comp(6237..6599)
DNA (363bp) protein (121aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2714_8
unknown

Not on your lists

6628..7173
DNA (546bp) protein (182aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2714_9
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(7448..8116)
DNA (669bp) protein (223aa)
DNA-binding response regulator LuxR family n=1 Tax=Patulibacter medicamentivorans RepID=H0E6G1_9ACTN
DNA-binding response regulator LuxR family {ECO:0000313|EMBL:EHN10750.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
putative two-component system response regulator
scnpilot_solids2_trim150_scaffold_2714_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(8116..9216)
DNA (1101bp) protein (367aa)
integral membrane sensor signal transduction histidine kinase (EC:2.7.13.3)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0W7_CONWI
Tax=RBG_16_Actinobacteria_68_12_curated
scnpilot_solids2_trim150_scaffold_2714_11
unknown

Not on your lists

9464..10144
DNA (681bp) protein (227aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2714_12
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10334..10768)
DNA (435bp) protein (145aa)
Putative uncharacterized protein n=1 Tax=Dietzia cinnamea P4 RepID=E6J5U1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KGM03717.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2714_13
Mycobacterium avium, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10986..11495
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00037065F1
Acetyltransferase family protein {ECO:0000313|EMBL:ETZ42869.1}; TaxID=1335419 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium avium MAV_120709_2344.;"
rimI; GCN5-related N-acetyltransferase
scnpilot_solids2_trim150_scaffold_2714_14
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11476..11967)
DNA (492bp) protein (164aa)
Methyltransferase type 11 n=1 Tax=Frankia sp. EUN1f RepID=D3CS28_9ACTO
Methyltransferase type 11 {ECO:0000313|EMBL:EFC86442.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
type 11 methyltransferase
scnpilot_solids2_trim150_scaffold_2714_15
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13207..13635
DNA (429bp) protein (143aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RKI1_BLASD
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:CCG02400.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
scnpilot_solids2_trim150_scaffold_2714_16
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13942..14817
DNA (876bp) protein (292aa)
Phytochrome-like protein cph2 n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B50309
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ43419.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
scnpilot_solids2_trim150_scaffold_2714_17
RifOxyA12_full_OD1_Moranbacteria_44_15_curated, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

14870..19918
DNA (5049bp) protein (1683aa)
Nitrous oxidase accessory protein n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R1Q5_OWEHD
nitrous oxidase accessory protein
Tax=RifOxyA12_full_OD1_Moranbacteria_44_15_curated
scnpilot_solids2_trim150_scaffold_2714_18
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20157..20615
DNA (459bp) protein (153aa)
Transcriptional regulator, XRE family n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PVA0_KRIFD
XRE family transcriptional regulator {ECO:0000313|EMBL:KEI44793.1}; TaxID=28042 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.;"
XRE family transcriptional regulator
scnpilot_solids2_trim150_scaffold_2714_19
Streptomyces sviceus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20433..21368)
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Streptomyces canus RepID=UPI00035E289E
Putative uncharacterized protein {ECO:0000313|EMBL:EDY58522.1}; TaxID=463191 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sviceus ATCC 29083.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2714_20
unknown

Not on your lists

comp(21352..21594)
DNA (243bp) protein (81aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2714_21
Streptomyces coelicolor, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21549..22889)
DNA (1341bp) protein (447aa)
hypothetical protein n=1 Tax=Nocardia sp. 348MFTsu5.1 RepID=UPI000363FADE
SCK7.26; hypothetical protein
Putative secreted protein {ECO:0000313|EMBL:CAC05898.1}; TaxID=100226 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group.;" source="Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145).;"
scnpilot_solids2_trim150_scaffold_2714_22
unknown

Not on your lists

comp(22886..22981)
DNA (96bp) protein (32aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2714_23
Streptomyces sviceus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22981..23265)
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Nocardia sp. 348MFTsu5.1 RepID=UPI00037C91B7
Glycosyl transferase {ECO:0000313|EMBL:EDY58524.1}; TaxID=463191 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sviceus ATCC 29083.;"
putative glycosyltransferase
scnpilot_solids2_trim150_scaffold_2714_24
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23238..24335)
DNA (1098bp) protein (366aa)
Glycosyl transferase n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5I0B9_9ACTO rbh
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR66955.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
glycosyl transferase rbh
scnpilot_solids2_trim150_scaffold_2714_25
Kitasatospora setae, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24341..25678)
DNA (1338bp) protein (446aa)
Putative UDP-glucose dehydrogenase {ECO:0000313|EMBL:BAJ27105.1}; EC=1.1.1.- {ECO:0000313|EMBL:BAJ27105.1};; TaxID=452652 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC; A-0304 / NBRC 14216 / KM-6054) (Streptomyces setae).;"
Putative UDP-glucose dehydrogenase n=1 Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4N7C4_KITSK rbh
putative UDP-glucose dehydrogenase rbh
scnpilot_solids2_trim150_scaffold_2714_26
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26172..27518)
DNA (1347bp) protein (449aa)
cysM_[H]; Cysteine synthase B (EC:2.5.1.47)
cysteine synthase n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI000382A2B9 rbh
Tax=RBG_16_Deltaproteobacteria_71_12_curated
scnpilot_solids2_trim150_scaffold_2714_27
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27565..27753)
DNA (189bp) protein (63aa)
hypothetical protein n=1 Tax=Candidatus Microthrix parvicella RepID=UPI0003715ADA
Putative Peptidase M10A and M12B matrixin and adamalysin {ECO:0000313|EMBL:CCM64638.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
peptidase metallopeptidase
scnpilot_solids2_trim150_scaffold_2714_28
unknown

Not on your lists

comp(27750..28406)
DNA (657bp) protein (219aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2714_29
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(28413..30419)
DNA (2007bp) protein (669aa)
acetate/CoA ligase; K01895 acetyl-CoA synthetase [EC:6.2.1.1] id=14629892 bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin8_Chloro organism_group=Chloroflexi
acetate/CoA ligase; K01895 acetyl-CoA synthetase [EC:6.2.1.1]
Tax=CSP1_4_Chloroflexi
scnpilot_solids2_trim150_scaffold_2714_30
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30553..31173)
DNA (621bp) protein (207aa)
GPR1/FUN34/yaaH family protein n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LTS9_ACIC1
GPR1/FUN34/yaaH family protein; K07034
GPR1/FUN34/yaaH family protein {ECO:0000313|EMBL:ABK52839.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
Displaying items 1-30 of 33 in total

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