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scnpilot_solids2_trim150_scaffold_2771

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2771_1
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

62..1390
DNA (1329bp) protein (443aa)
Putative transglycosylase n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6X157_9MICO rbh
Putative transglycosylase {ECO:0000313|EMBL:GAB98107.1}; TaxID=1184609 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;"
cell wall-associated hydrolase
scnpilot_solids2_trim150_scaffold_2771_2
Arctogadus glacialis, Arctogadus, Gadiformes, Neopterygii, Chordata, Metazoa

Not on your lists

1387..2922
DNA (1536bp) protein (512aa)
Uncharacterized protein n=1 Tax=Eimeria maxima RepID=U6M9K4_EIMMA
Antifreeze glycoprotein {ECO:0000313|EMBL:AAQ09569.1}; TaxID=185735 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Zeiogadaria; Gadariae; Gadiformes; Gadoidei; Gadidae; Arctogadus.;" source="Arctogadus glacialis (Arctic cod).;"
algP; putative alginate regulatory protein AlgP
scnpilot_solids2_trim150_scaffold_2771_3
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2938..3633
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00037D2D1F
Flagellar hook capping protein {ECO:0000313|EMBL:KGM08846.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
flagellar hook capping protein; K02389 flagellar basal-body rod modification protein FlgD
scnpilot_solids2_trim150_scaffold_2771_4
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3664..4470
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WJQ4_ACTMD
hypothetical protein; K02390 flagellar hook protein FlgE
Uncharacterized protein {ECO:0000313|EMBL:ACU36279.1}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
scnpilot_solids2_trim150_scaffold_2771_5
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4771..5076
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI000370D28D
flbD; flagellar protein FlbD
Flagellar protein FlbD {ECO:0000313|EMBL:AGZ46350.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
scnpilot_solids2_trim150_scaffold_2771_6
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5076..5843
DNA (768bp) protein (256aa)
flagellar motor protein MotA n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B526E6 rbh
MotA/TolQ/ExbB proton channel; K02556 chemotaxis protein MotA
MotA/TolQ/ExbB proton channel {ECO:0000313|EMBL:ACU36277.1}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
scnpilot_solids2_trim150_scaffold_2771_7
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5844..6977
DNA (1134bp) protein (378aa)
flagellar motor protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B698B3
Chemotaxis protein motB; K02557 chemotaxis protein MotB
Chemotaxis protein motB {ECO:0000313|EMBL:AEV88801.1}; TaxID=134676 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
scnpilot_solids2_trim150_scaffold_2771_8
unknown

Not on your lists

7145..7423
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B3C0D8
scnpilot_solids2_trim150_scaffold_2771_9
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7622..8551
DNA (930bp) protein (310aa)
flagellar motor switch protein FliM n=1 Tax=Actinoplanes globisporus RepID=UPI0003760118
fliM; Flagellar motor switch protein FliM
Flagellar motor switch protein FliM {ECO:0000313|EMBL:AGZ46354.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
scnpilot_solids2_trim150_scaffold_2771_10
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8628..9398
DNA (771bp) protein (257aa)
Flagellar motor switch protein FliN n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5WE98_9ACTO
fliN; Flagellar motor switch protein FliN
Flagellar motor switch protein FliN {ECO:0000313|EMBL:AGZ46355.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
scnpilot_solids2_trim150_scaffold_2771_11
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9405..9887
DNA (483bp) protein (161aa)
Flagellar protein FliO/FliZ n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5WEI3_9ACTO
fliO; flagellar protein FliO/FliZ
Flagellar protein FliO/FliZ {ECO:0000313|EMBL:AGZ46356.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
scnpilot_solids2_trim150_scaffold_2771_12
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9884..10822
DNA (939bp) protein (313aa)
fliP; flagellar biosynthesis protein FliP (EC:3.1.1.3); K02419 flagellar biosynthetic protein FliP rbh
flagellar biosynthesis protein FliP n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B4D0BF rbh
Flagellar biosynthesis protein flip {ECO:0000313|EMBL:KGM08916.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
scnpilot_solids2_trim150_scaffold_2771_13
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10832..11101
DNA (270bp) protein (90aa)
flagellar biosynthesis protein FliQ n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B34AFA
export protein FliQ; K02420 flagellar biosynthetic protein FliQ
Export protein FliQ, family 3 {ECO:0000313|EMBL:ABL80267.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
scnpilot_solids2_trim150_scaffold_2771_14
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11146..11907
DNA (762bp) protein (254aa)
flagellar biosynthesis protein FliR n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B79F47
type III secretion system inner membrane R protein; K02421 flagellar biosynthetic protein FliR
Type III secretion system inner membrane R protein {ECO:0000313|EMBL:ACU36269.1}; Flags: Precursor;; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
scnpilot_solids2_trim150_scaffold_2771_15
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11904..13016
DNA (1113bp) protein (371aa)
type III secretion protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B58412 rbh
flhB; putative flagellar biosynthesis protein; K02401 flagellar biosynthetic protein FlhB rbh
Putative flagellar biosynthesis protein {ECO:0000313|EMBL:BAL92856.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
scnpilot_solids2_trim150_scaffold_2771_16
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13029..14387)
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XIZ6_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV76583.1}; Flags: Precursor;; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_2771_17
unknown

Not on your lists

comp(14504..14875)
DNA (372bp) protein (124aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2771_18
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14906..15091)
DNA (186bp) protein (62aa)
Uncharacterized protein n=3 Tax=Brucella melitensis RepID=N7N1Y7_BRUML
Uncharacterised protein {ECO:0000313|EMBL:CRE23043.1}; TaxID=520 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis.;"
scnpilot_solids2_trim150_scaffold_2771_19
unknown

Not on your lists

comp(15314..15472)
DNA (159bp) protein (53aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2771_20
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15601..16581
DNA (981bp) protein (327aa)
flagellar biosynthesis protein FlhA n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B53F82
Flagellar biosynthesis protein FlhA {ECO:0000313|EMBL:EXG80957.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
flagellar biosynthesis protein FlhA; K02400 flagellar biosynthesis protein FlhA
scnpilot_solids2_trim150_scaffold_2771_21
unknown

Not on your lists

16556..16765
DNA (210bp) protein (70aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2771_22
Pseudogymnoascus pannorum, Pseudogymnoascus, Leotiomycetes, Ascomycota, Fungi

Not on your lists

16752..18563
DNA (1812bp) protein (604aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B46044
Uncharacterized protein {ECO:0000313|EMBL:KFY82651.1}; TaxID=1420911 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Leotiomycetes incertae sedis; Pseudeurotiaceae; Pseudogymnoascus.;" source="Pseudogymnoascus pannorum VKM F-4517 (FW-2822).;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2771_23
unknown

Not on your lists

18542..18778
DNA (237bp) protein (79aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2771_24
Mycobacterium hassiacum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19061..20254)
DNA (1194bp) protein (398aa)
Elongation factor Tu n=1 Tax=Mycobacterium hassiacum DSM 44199 RepID=K5BKH5_9MYCO rbh
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1122247 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium hassiacum DSM 44199.;"
tuf; elongation factor Tu rbh
scnpilot_solids2_trim150_scaffold_2771_25
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20552..22648)
DNA (2097bp) protein (699aa)
Elongation factor G n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XCF9_NAKMY
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
elongation factor G; K02355 elongation factor G
scnpilot_solids2_trim150_scaffold_2771_26
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(22829..23299)
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XCF8_NAKMY
30S ribosomal protein S7; K02992 small subunit ribosomal protein S7
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_2771_27
Kitasatospora griseola, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(23299..23673)
DNA (375bp) protein (125aa)
30S ribosomal protein S12 n=1 Tax=Streptomyces scabrisporus RepID=UPI0003674E8C
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=2064 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora griseola (Streptomyces griseolosporeus).;"
Displaying 27 items

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