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scnpilot_solids2_trim150_scaffold_2927

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2927_1
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..820)
DNA (819bp) protein (273aa)
Oxidoreductase domain protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XAS7_NAKMY
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ACV79330.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_2927_2
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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867..2447
DNA (1581bp) protein (527aa)
UvrABC system protein A n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XAS6_NAKMY
excinuclease ABCsubunit A; K03701 excinuclease ABC subunit A
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_2927_3
unknown

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comp(2369..2533)
DNA (165bp) protein (55aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2927_4
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2829..3779
DNA (951bp) protein (317aa)
UvrABC system protein A n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XAS6_NAKMY
excinuclease ABCsubunit A; K03701 excinuclease ABC subunit A
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_2927_5
unknown

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comp(3793..4449)
DNA (657bp) protein (219aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2927_6
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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4476..4757
DNA (282bp) protein (94aa)
hisE; phosphoribosyl-ATP pyrophosphatase (EC:3.6.1.31); K01523 phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
Phosphoribosyl-ATP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071052}; Short=PRA-PH {ECO:0000256|HAMAP-Rule:MF_01020};; EC=3.6.1.31 {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071044};; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;"
Phosphoribosyl-ATP pyrophosphatase n=2 Tax=Rhodococcus RepID=HIS2_RHOSR
scnpilot_solids2_trim150_scaffold_2927_7
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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4890..5738
DNA (849bp) protein (283aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302};; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
hisG; ATP phosphoribosyltransferase; K00765 ATP phosphoribosyltransferase [EC:2.4.2.17]
ATP phosphoribosyltransferase n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X3P7_9PSEU
scnpilot_solids2_trim150_scaffold_2927_8
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5773..6576)
DNA (804bp) protein (268aa)
thioesterase n=1 Tax=Arthrobacter sp. 161MFSha2.1 RepID=UPI000361F8E3
Thioesterase {ECO:0000313|EMBL:EWT05541.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2927_9
Mycobacterium abscessus, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(6587..7444)
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Actinoalloteichus spitiensis RepID=UPI00036E1576
hypothetical protein; K07465 putative RecB family exonuclease
Uncharacterized protein {ECO:0000313|EMBL:EHM21276.1}; TaxID=1091046 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium abscessus.;" source="Mycobacterium abscessus subsp. bolletii BD.;"
scnpilot_solids2_trim150_scaffold_2927_10
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7542..8654
DNA (1113bp) protein (371aa)
Peptidase M50 n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XAR1_NAKMY
peptidase M50
Peptidase M50 {ECO:0000313|EMBL:ACV79314.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_2927_11
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8651..9490
DNA (840bp) protein (280aa)
tRNA (adenine-N(1)-)-methyltransferase (EC:2.1.1.36); K07442 tRNA (adenine57-N1/adenine58-N1)-methyltransferase [EC:2.1.1.219 2.1.1.220] rbh
tRNA (Adenine-N(1)-)-methyltransferase n=2 Tax=Saccharopolyspora erythraea RepID=A4FBX4_SACEN rbh
SAM-dependent methlyltransferase {ECO:0000313|EMBL:KEI44902.1}; TaxID=28042 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.;"
scnpilot_solids2_trim150_scaffold_2927_12
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9572..11233
DNA (1662bp) protein (554aa)
Proteasome-associated ATPase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=ARC_NAKMY
ATPase AAA central domain-containing protein; K13527 proteasome-associated ATPase
Proteasome-associated ATPase {ECO:0000255|HAMAP-Rule:MF_02112}; AAA ATPase forming ring-shaped complexes {ECO:0000255|HAMAP-Rule:MF_02112}; Short=ARC {ECO:0000255|HAMAP-Rule:MF_02112};; Proteasomal ATPase {ECO:0000255|HAMAP-Rule:MF_02112}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_2927_13
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11336..12844
DNA (1509bp) protein (503aa)
hypothetical protein; K13571 proteasome accessory factor A [EC:6.3.2.-]
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XAQ6_NAKMY
Uncharacterized protein {ECO:0000313|EMBL:ACV79309.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_2927_14
Gordonia terrae, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12938..13129
DNA (192bp) protein (64aa)
Prokaryotic ubiquitin-like protein Pup n=2 Tax=Rhodococcus RepID=M2XLM9_9NOCA
hypothetical protein
Putative proteasome accessory factor {ECO:0000313|EMBL:GAB42345.1}; TaxID=1089454 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia terrae NBRC 100016.;"
scnpilot_solids2_trim150_scaffold_2927_15
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13126..13971
DNA (846bp) protein (282aa)
20S proteasome subunits A and B; K03433 proteasome beta subunit [EC:3.4.25.1]
Proteasome subunit beta {ECO:0000255|HAMAP-Rule:MF_02113}; EC=3.4.25.1 {ECO:0000255|HAMAP-Rule:MF_02113};; 20S proteasome beta subunit {ECO:0000255|HAMAP-Rule:MF_02113}; Proteasome core protein PrcB {ECO:0000255|HAMAP-Rule:MF_02113}; Flags: Precursor;; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Proteasome subunit beta n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=PSB_NAKMY
scnpilot_solids2_trim150_scaffold_2927_16
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14032..14478
DNA (447bp) protein (149aa)
20S proteasome subunits A and B; K03432 proteasome alpha subunit [EC:3.4.25.1]
Proteasome subunit alpha {ECO:0000255|HAMAP-Rule:MF_00289}; EC=3.4.25.1 {ECO:0000255|HAMAP-Rule:MF_00289};; 20S proteasome alpha subunit {ECO:0000255|HAMAP-Rule:MF_00289}; Proteasome core protein PrcA {ECO:0000255|HAMAP-Rule:MF_00289}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Proteasome subunit alpha n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=PSA_NAKMY
Displaying 16 items

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