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scnpilot_solids2_trim150_scaffold_4228

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_4228_1
unknown

Not on your lists

2..658
DNA (657bp) protein (219aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_4228_2
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

658..1278
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XJW4_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV76647.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_4228_3
unknown

Not on your lists

comp(1237..2607)
DNA (1371bp) protein (457aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_4228_4
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3004..3813
DNA (810bp) protein (270aa)
SEC-C motif domain protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XJW5_NAKMY
SEC-C motif domain-containing protein
SEC-C motif domain protein {ECO:0000313|EMBL:ACV76648.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_4228_5
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4153..5910
DNA (1758bp) protein (586aa)
hypothetical protein n=1 Tax=Dasania marina RepID=UPI0003787379
diguanylate cyclase/phosphodiesterase
Tax=RBG_16_Gallionellales_57_15_curated
scnpilot_solids2_trim150_scaffold_4228_6
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5980..6348)
DNA (369bp) protein (123aa)
Abortive infection protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XJW6_NAKMY
abortive infection protein
Abortive infection protein {ECO:0000313|EMBL:ACV76649.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_4228_7
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(6768..7745)
DNA (978bp) protein (326aa)
pfkB; 1-phosphofructokinase (EC:2.7.1.56); K00882 1-phosphofructokinase [EC:2.7.1.56]
1-phosphofructokinase {ECO:0000313|EMBL:ACM07318.1}; EC=2.7.1.56 {ECO:0000313|EMBL:ACM07318.1};; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
phosphofructokinase n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI00036B5F36
scnpilot_solids2_trim150_scaffold_4228_8
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7786..8853
DNA (1068bp) protein (356aa)
prephenate dehydratase (EC:4.2.1.51); K04518 prephenate dehydratase [EC:4.2.1.51]
Prephenate dehydratase {ECO:0000256|RuleBase:RU361254}; Short=PDT {ECO:0000256|RuleBase:RU361254};; EC=4.2.1.51 {ECO:0000256|RuleBase:RU361254};; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Prephenate dehydratase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XJW8_NAKMY
scnpilot_solids2_trim150_scaffold_4228_9
Arthrobacter sp. SPG23, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8850..9536
DNA (687bp) protein (229aa)
phosphoglycerate mutase; K15634 probable phosphoglycerate mutase [EC:5.4.2.1]
histidine phosphatase n=1 Tax=Arthrobacter sp. 131MFCol6.1 RepID=UPI00038040BB
SPG23_c32, whole genome shotgun sequence {ECO:0000313|EMBL:KIS25497.1}; TaxID=1610703 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. SPG23.;"
scnpilot_solids2_trim150_scaffold_4228_10
Dietzia cinnamea, Dietzia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9652..10050)
DNA (399bp) protein (133aa)
Putative uncharacterized protein n=1 Tax=Dietzia cinnamea P4 RepID=E6J479_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EFV93590.1}; TaxID=910954 species="Bacteria; Actinobacteria; Corynebacteriales; Dietziaceae; Dietzia.;" source="Dietzia cinnamea P4.;"
SCM1.39c; hypothetical protein
scnpilot_solids2_trim150_scaffold_4228_11
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10138..10485)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XJX8_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV76661.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_4228_12
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10682..11857
DNA (1176bp) protein (392aa)
seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11]
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Serine--tRNA ligase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XJX9_NAKMY
scnpilot_solids2_trim150_scaffold_4228_13
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11940..13058
DNA (1119bp) protein (373aa)
Cof-like hydrolase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XK24_NAKMY
cof family hydrolase; K07024
Cof-like hydrolase {ECO:0000313|EMBL:ACV76707.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_4228_14
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13376..14644)
DNA (1269bp) protein (423aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
Two-component system histidine kinase n=3 Tax=Amycolatopsis mediterranei RepID=D8I8Y5_AMYMU
mprB; two-component system histidine kinase
scnpilot_solids2_trim150_scaffold_4228_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14641..15333)
DNA (693bp) protein (231aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJU4_PSEUX
winged helix family two component transcriptional regulator; K07669 two-component system, OmpR family, response regulator MprA
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AEA26969.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
scnpilot_solids2_trim150_scaffold_4228_16
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15330..16214)
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Smaragdicoccus niigatensis RepID=UPI0003803107
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR62080.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
ApbE family lipoprotein; K03734 thiamine biosynthesis lipoprotein
scnpilot_solids2_trim150_scaffold_4228_17
Streptomyces sp. HGB0020, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16204..16446)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Streptomyces sp. HGB0020 RepID=S2Y9T9_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD61348.1}; TaxID=1078086 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HGB0020.;"
hypothetical protein
Displaying 17 items

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