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scnpilot_solids2_trim150_scaffold_4524

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_4524_1
unknown

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comp(3..98)
DNA (96bp) protein (32aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_4524_2
Rhodococcus sp. JVH1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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205..708
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI000373A808
MarR family protein {ECO:0000313|EMBL:EJI98088.1}; TaxID=745408 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. JVH1.;"
regulatory protein MarR
scnpilot_solids2_trim150_scaffold_4524_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(734..2371)
DNA (1638bp) protein (546aa)
cyclohexanecarboxylate-CoA ligase; K04116 cyclohexanecarboxylate-CoA ligase [EC:6.2.1.-]
Cyclohexanecarboxylate-CoA ligase n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VL86_RHOPX
Cyclohexanecarboxylate-CoA ligase {ECO:0000313|EMBL:ADU45690.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
scnpilot_solids2_trim150_scaffold_4524_4
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2386..3144)
DNA (759bp) protein (253aa)
Putative alcohol dehydrogenase n=1 Tax=Azoarcus sp. KH32C RepID=H0Q5W0_9RHOO
putative alcohol dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
scnpilot_solids2_trim150_scaffold_4524_5
Agrococcus pavilionensis, Agrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3346..4857
DNA (1512bp) protein (504aa)
methylmalonate-semialdehyde dehydrogenase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000361CC56 rbh
Methylmalonate-semialdehyde dehydrogenase {ECO:0000313|EMBL:ERG63314.1}; TaxID=1330458 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agrococcus.;" source="Agrococcus pavilionensis RW1.;"
methylmalonate-semialdehyde dehydrogenase rbh
scnpilot_solids2_trim150_scaffold_4524_6
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

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5865..6335
DNA (471bp) protein (157aa)
(2Fe-2S)-binding domain-containing protein; K03518 carbon-monoxide dehydrogenase small subunit [EC:1.2.99.2]
(2Fe-2S)-binding domain protein n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WU37_KYRT2
(2Fe-2S)-binding domain protein {ECO:0000313|EMBL:ADG07289.1}; TaxID=562970 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Kyrpidia.;" source="Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) (Bacillus; tusciae).;"
scnpilot_solids2_trim150_scaffold_4524_7

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6332..9451
DNA (3120bp) protein (1040aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
aldehyde dehydrogenase n=1 Tax=Thermus islandicus RepID=UPI0003B6F066
Oxidoreductase {ECO:0000313|EMBL:BAL55817.1}; TaxID=198431 species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
scnpilot_solids2_trim150_scaffold_4524_8
Rhodococcus sp. EsD8, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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9705..10490
DNA (786bp) protein (262aa)
Enoyl-CoA hydratase/carnithine racemase n=1 Tax=Rhodococcus sp. EsD8 RepID=N1MCK3_9NOCA
Enoyl-CoA hydratase/carnithine racemase {ECO:0000313|EMBL:CCW13297.1}; TaxID=1301088 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. EsD8.;"
enoyl-CoA hydratase
scnpilot_solids2_trim150_scaffold_4524_9
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

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10487..11005
DNA (519bp) protein (173aa)
Thioesterase superfamily protein n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LRX4_ACIC1
thioesterase superfamily protein
Thioesterase superfamily protein {ECO:0000313|EMBL:ABK52184.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
scnpilot_solids2_trim150_scaffold_4524_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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11141..11692
DNA (552bp) protein (184aa)
Putative uncharacterized protein id=3847110 bin=GWC2_Methylomirabilis_70_16 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
scnpilot_solids2_trim150_scaffold_4524_11
Streptomyces griseoaurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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11800..12816
DNA (1017bp) protein (339aa)
dihydroxyacetone kinase subunit 1; K05878 dihydroxyacetone kinase, N-terminal domain [EC:2.7.1.-]
Putative dihydroxyacetone kinase subunit 1 n=1 Tax=Streptomyces griseoaurantiacus M045 RepID=F3NDF3_9ACTO rbh
Putative dihydroxyacetone kinase subunit 1 {ECO:0000313|EMBL:EGG48590.1}; TaxID=996637 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseoaurantiacus M045.;"
scnpilot_solids2_trim150_scaffold_4524_12
Streptomyces griseoaurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12807..13436
DNA (630bp) protein (210aa)
glycerone kinase (EC:2.7.1.29); K00863 dihydroxyacetone kinase [EC:2.7.1.29]
hypothetical protein n=1 Tax=Streptomyces sulphureus RepID=UPI000365DAFF
Putative dihydroxyacetone kinase subunit 2 {ECO:0000313|EMBL:EGG48589.1}; TaxID=996637 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseoaurantiacus M045.;"
scnpilot_solids2_trim150_scaffold_4524_13
Actibacterium mucosum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13743..15029
DNA (1287bp) protein (429aa)
hypothetical protein n=1 Tax=Burkholderia sp. JPY347 RepID=UPI00036715E2 rbh
Ribose transport system substrate-binding protein {ECO:0000313|EMBL:KAJ53958.1}; TaxID=1454373 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Actibacterium mucosum KCTC 23349.;"
ribose transport system substrate-binding protein
scnpilot_solids2_trim150_scaffold_4524_14
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15089..16498
DNA (1410bp) protein (470aa)
sugar ABC transporter ATP-binding protein; K10441 ribose transport system ATP-binding protein [EC:3.6.3.17] rbh
sugar ABC transporter n=1 Tax=Rhodococcus opacus RepID=UPI00029CC99B rbh
Ribose import ATP-binding protein RbsA 2 {ECO:0000313|EMBL:AHK29084.1}; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;"
Displaying 14 items

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