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scnpilot_solids2_trim150_scaffold_4683

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_4683_1
Mycobacterium sinense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..224)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Mycobacterium sp. (strain JDM601) RepID=F5YWP7_MYCSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF35334.1}; TaxID=875328 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium sp. (strain JDM601).;"
scnpilot_solids2_trim150_scaffold_4683_2
Georgenia sp. SUBG003, Georgenia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

400..648
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003609774
Uncharacterized protein {ECO:0000313|EMBL:KEP22726.1}; TaxID=1497974 species="Bacteria; Actinobacteria; Micrococcales; Bogoriellaceae; Georgenia.;" source="Georgenia sp. SUBG003.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_4683_3
Amycolatopsis halophila, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(596..2740)
DNA (2145bp) protein (715aa)
copper-translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] rbh
Copper/silver-translocating P-type ATPase n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X5P5_9PSEU rbh
Copper/silver-translocating P-type ATPase,heavy metal-translocating P-type ATPase, Cd/Co/Hg/Pb/Zn-transporting {ECO:0000313|EMBL:ETA66572.1}; TaxID=592678 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis halophila YIM 93223.;"
scnpilot_solids2_trim150_scaffold_4683_4
unknown

Not on your lists

comp(2879..3553)
DNA (675bp) protein (225aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_4683_5
unknown

Not on your lists

comp(4101..4406)
DNA (306bp) protein (102aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_4683_6
Mobilicoccus pelagius, Mobilicoccus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4637..5686
DNA (1050bp) protein (350aa)
Putative uncharacterized protein n=1 Tax=Mobilicoccus pelagius NBRC 104925 RepID=H5USP7_9MICO rbh
Putative uncharacterized protein {ECO:0000313|EMBL:GAB48755.1}; TaxID=1089455 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Mobilicoccus.;" source="Mobilicoccus pelagius NBRC 104925.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_4683_7
Amycolicicoccus subflavus, Amycolicicoccus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5841..6677
DNA (837bp) protein (279aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1) RepID=F6ERW2_AMYSD rbh
glyoxalase/bleomycin resistance protein/dioxygenase; K06996 rbh
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:AEF40777.1}; TaxID=443218 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Amycolicicoccus.;" source="Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1).;"
scnpilot_solids2_trim150_scaffold_4683_8
Streptomyces lydicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6843..8069
DNA (1227bp) protein (409aa)
cytochrome P450 n=1 Tax=Streptomyces sp. MspMP-M5 RepID=UPI00037EAAE4
Cytochrome P450 {ECO:0000313|EMBL:AJT64395.1}; TaxID=1403539 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lydicus A02.;"
cytochrome P450
scnpilot_solids2_trim150_scaffold_4683_9
unknown

Not on your lists

8193..8513
DNA (321bp) protein (107aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_4683_10
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8568..8759)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 RepID=M5B784_9MICO
Glyoxalase {ECO:0000313|EMBL:EWT05218.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_4683_11
unknown

Not on your lists

comp(9361..9615)
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI00036371C9
scnpilot_solids2_trim150_scaffold_4683_12
Actinomyces europaeus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9887..10072)
DNA (186bp) protein (62aa)
hypothetical protein n=1 Tax=Yaniella halotolerans RepID=UPI0003B73E6A
Uncharacterized protein {ECO:0000313|EMBL:EPD30550.1}; TaxID=883069 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces europaeus ACS-120-V-Col10b.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_4683_13
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10190..10573)
DNA (384bp) protein (128aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
Alkylhydroperoxidase like protein, AhpD family n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SN63_NOCSJ
alkylhydroperoxidase
scnpilot_solids2_trim150_scaffold_4683_14
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10704..11105
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XVM6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON23402.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_4683_15
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11105..11425
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9V0Q1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EGD40940.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
copper-sensing transcriptional repressor CsoR
scnpilot_solids2_trim150_scaffold_4683_16
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11335..11571)
DNA (237bp) protein (79aa)
CopG family transcripitonal regulator n=1 Tax=Serinicoccus profundi RepID=UPI000255F4FB
CopG family transcripitonal regulator {ECO:0000313|EMBL:KGN30853.1}; TaxID=1385520 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
CopG/DNA-binding domain-containing protein
scnpilot_solids2_trim150_scaffold_4683_17
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12198..13238
DNA (1041bp) protein (347aa)
Integrase family protein n=1 Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1BWQ4_XYLCX rbh
Mobile element protein {ECO:0000313|EMBL:AIY15800.2}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
integrase family protein rbh
scnpilot_solids2_trim150_scaffold_4683_18
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13287..14861)
DNA (1575bp) protein (525aa)
hypothetical protein n=1 Tax=Mycobacterium sp. 141 RepID=UPI00037CBEC0
Putative Ferric iron ABC transporter permease protein {ECO:0000313|EMBL:CCM62641.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
binding-protein-dependent transporters inner membrane component; K02011 iron(III) transport system permease protein rbh
scnpilot_solids2_trim150_scaffold_4683_19
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14951..15700)
DNA (750bp) protein (250aa)
Putative Fe(3+)-binding periplasmic protein n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4YX24_9ACTN
Putative Fe(3+)-binding periplasmic protein {ECO:0000313|EMBL:CCM62640.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
extracellular solute-binding protein; K02012 iron(III) transport system substrate-binding protein
scnpilot_solids2_trim150_scaffold_4683_20
Rhodococcus qingshengii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16088..16630)
DNA (543bp) protein (181aa)
Fe(3+) ions import ATP-binding protein FbpC {ECO:0000256|HAMAP-Rule:MF_01706}; EC=3.6.3.30 {ECO:0000256|HAMAP-Rule:MF_01706};; TaxID=334542 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus qingshengii.;"
sugar ABC transporter n=1 Tax=Salinispora pacifica RepID=UPI00036CAB56
iron ABC transporter ATP-binding protein
Displaying 20 items

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