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scnpilot_solids2_trim150_scaffold_5210

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_5210_1
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2..1744
DNA (1743bp) protein (581aa)
glycosyl transferase family 1 n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B42F4D rbh
Glycosyl transferase group 1 {ECO:0000313|EMBL:CDK01883.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
group 1 glycosyl transferase rbh
scnpilot_solids2_trim150_scaffold_5210_2
Dermacoccus sp. Ellin185, Dermacoccus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1741..2802
DNA (1062bp) protein (354aa)
epimerase/dehydratase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2]
NAD dependent epimerase/dehydratase family protein n=1 Tax=Dermacoccus sp. Ellin185 RepID=E3B8F1_9MICO rbh
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:EFP58654.1}; TaxID=188626 species="Bacteria; Actinobacteria; Micrococcales; Dermacoccaceae; Dermacoccus.;" source="Dermacoccus sp. Ellin185.;"
scnpilot_solids2_trim150_scaffold_5210_3
Rothia mucilaginosa, Rothia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2799..3794
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Rothia mucilaginosa ATCC 25296 RepID=C6R560_9MICC rbh
Uncharacterized protein {ECO:0000313|EMBL:EET74937.1}; TaxID=553201 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Rothia.;" source="Rothia mucilaginosa ATCC 25296.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_5210_4
Rothia dentocariosa, Rothia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3785..4837
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Rothia dentocariosa M567 RepID=D8USP3_9MICC
Uncharacterized protein {ECO:0000313|EMBL:EFJ76771.1}; TaxID=563032 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Rothia.;" source="Rothia dentocariosa M567.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_5210_5
Rothia mucilaginosa, Rothia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4834..5460
DNA (627bp) protein (209aa)
CMP-N-acetylneuraminic acid synthetase; K00983 N-acylneuraminate cytidylyltransferase [EC:2.7.7.43]
Cytidylyltransferase {ECO:0000313|EMBL:EET74935.1}; EC=2.7.7.- {ECO:0000313|EMBL:EET74935.1};; TaxID=553201 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Rothia.;" source="Rothia mucilaginosa ATCC 25296.;"
CMP-N-acetylneuraminic acid synthetase n=1 Tax=Rothia mucilaginosa (strain DY-18) RepID=D2NP48_ROTMD
scnpilot_solids2_trim150_scaffold_5210_6
Mycobacterium sinense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(5494..5910)
DNA (417bp) protein (139aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=875328 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium sp. (strain JDM601).;"
Ribonuclease VapC n=1 Tax=Mycobacterium sp. (strain JDM601) RepID=F5Z214_MYCSD
hypothetical protein; K07062
scnpilot_solids2_trim150_scaffold_5210_7
unknown

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comp(5907..6167)
DNA (261bp) protein (87aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_5210_8
Rothia mucilaginosa, Rothia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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6221..7600
DNA (1380bp) protein (460aa)
sialic acid synthase; K01654 N-acetylneuraminate synthase [EC:2.5.1.56] rbh
Sialic acid synthase n=2 Tax=Rothia mucilaginosa RepID=D2NP47_ROTMD rbh
Sialic acid synthase {ECO:0000313|EMBL:BAI65415.1}; TaxID=680646 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Rothia.;" source="Rothia mucilaginosa (strain DY-18) (Stomatococcus mucilaginosus).;"
scnpilot_solids2_trim150_scaffold_5210_9
Micrococcus luteus, Micrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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7597..8394
DNA (798bp) protein (266aa)
N-acylneuraminate-9-phosphate synthase; K01654 N-acetylneuraminate synthase [EC:2.5.1.56]
acetylneuraminic acid synthetase n=1 Tax=Micrococcus luteus RepID=UPI0002FF8DD3
SAF domain protein {ECO:0000313|EMBL:EZP31061.1}; TaxID=1270 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Micrococcus.;" source="Micrococcus luteus (Micrococcus lysodeikticus).;"
scnpilot_solids2_trim150_scaffold_5210_10

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comp(8424..8969)
DNA (546bp) protein (182aa)
PilT protein domain protein n=2 Tax=mine drainage metagenome RepID=T1A8X2_9ZZZZ
PilT protein domain protein {ECO:0000313|EMBL:EQD53467.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
PilT protein domain-containing protein
scnpilot_solids2_trim150_scaffold_5210_11
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9322..10548
DNA (1227bp) protein (409aa)
Glycogen synthase {ECO:0000313|EMBL:KJL31153.1}; EC=2.4.1.11 {ECO:0000313|EMBL:KJL31153.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein n=1 Tax=Brachybacterium muris RepID=UPI00034D429A
glycosyl transferase
scnpilot_solids2_trim150_scaffold_5210_12
unknown

Not on your lists

comp(10609..10689)
DNA (81bp) protein (27aa)

This feature has no annotations

Displaying 12 items

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