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scnpilot_solids2_trim150_scaffold_1355_4

Organism: SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241

near complete RP 48 / 55 MC: 3 BSCG 47 / 51 MC: 1 ASCG 13 / 38
Location: comp(1716..2990)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Amycolatopsis nigrescens RepID=UPI00035F15F6 similarity UNIREF
DB: UNIREF100
  • Identity: 56.3
  • Coverage: 398.0
  • Bit_score: 427
  • Evalue 1.80e-116
Uncharacterized protein {ECO:0000313|EMBL:AIJ23606.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.4
  • Coverage: 397.0
  • Bit_score: 419
  • Evalue 6.80e-114
ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 56.2
  • Coverage: 393.0
  • Bit_score: 412
  • Evalue 1.90e-112
  • rbh

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Taxonomy

Amycolatopsis methanolica → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1275
ATGAGCGAGCGGGACCGGACGAACCCGGGGGCGGCGTCATACCCGTCGTCGGGAGGCGGGAGCGGCGCGGGTTCCAGCGCGGACACCCTCACGGCGATCCGGCTGATCGCCGGGCGTGAACTGACCACCCGGCTGCGCAGCAAGGCGTTCCGGGTGATGACGGCGATCGTGCTGCTGGTGATCATCGGCACCGTGCTGGCCTTCCACCTGCTGCCGGGGATCGGCTCCGGCGGCTCGAAAGTCGGTGTGCTGCAAGCGGACGCCGCGTTGACGCAGCAGATCACGTCTGCGGCAGACGCGGTCGGCGCCCACGTCGACACCGTGCCGGTCGCCGATGAGGCCGCCGGCCGCACCCGGGTGGCCGACGGTACCCTCGATGCCCTGGTGATCCCACGGGAGAGCGGCCGGCTCCAAGTGGTCGTGCAGTCGGAACTCGACCCCGCGCTGCAGACGGCATTGATCGTAGCTTCACGAAACCTGGTTCAGGACAAGGCGATTCGCGCGCTCGGCGGTGACCCGGCCGAGGTCAATGCGGCGATCGCACAGGCTGGTGTGGTCGTCGATCCGATCAAACCGCCCAAGCAGTACGACGTGCAGCAGTTGGTGCTGGGCGCCGCCGCGGGCATCCTGATCTATCTGTCGCTGATGATCGGCGGGCAACTGGTGGCGCAAGGAGTGGTCGAGGAGAAGTCCAGCCGCGTCGTCGAGCTGCTGCTCGCAACCGTGCGGCCGTGGGAACTGATGGTCGGCAAGGTGCTGGGGATCGGTGCGCTGGGCATGATCCAGATCGTGCTGTACGGCGTCGTCGGCGTGGGGCTGTCGAGTGCGCTGGGCACGCTGACCCTGTCGGTGGGTTCCGCAGTGGGCACAGTGATCTGGCTGATCGTCTGGTACCTGGTGGGGTTCGTGATGTACGCGTTCGCGTTCGCGGCGGCCGGTGCCCTGGTCTCGCGCATGGAGGACGCCTCCGGCGTGATCATGCCGATCACCAGCTTCGTGATCGTCGGCTACGTGGTGGGCATCTCGGTGCTGCCGTCGGATCCGTCCAACAACTCGTTCGCCGAGGTGCTGTCGATCATCCCGCTGTTCGCACCCACTCTGATGCCGATGCGGCTGGCCATGGGCGGTGTGCCCGTGTGGGAGGCGGTGATGTCGCTGCTGCTCGCGCTGGCCACGATCCCGCTGTTGGCGGCGCTGGCCGGACGGATCTACCGCAACGCCGTGATCCACATCGGGTCCCGGGTGCCGCTGCGCAAGGCGCTCGCCCGCGGGTAG
PROTEIN sequence
Length: 425
MSERDRTNPGAASYPSSGGGSGAGSSADTLTAIRLIAGRELTTRLRSKAFRVMTAIVLLVIIGTVLAFHLLPGIGSGGSKVGVLQADAALTQQITSAADAVGAHVDTVPVADEAAGRTRVADGTLDALVIPRESGRLQVVVQSELDPALQTALIVASRNLVQDKAIRALGGDPAEVNAAIAQAGVVVDPIKPPKQYDVQQLVLGAAAGILIYLSLMIGGQLVAQGVVEEKSSRVVELLLATVRPWELMVGKVLGIGALGMIQIVLYGVVGVGLSSALGTLTLSVGSAVGTVIWLIVWYLVGFVMYAFAFAAAGALVSRMEDASGVIMPITSFVIVGYVVGISVLPSDPSNNSFAEVLSIIPLFAPTLMPMRLAMGGVPVWEAVMSLLLALATIPLLAALAGRIYRNAVIHIGSRVPLRKALARG*