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scnpilot_solids2_trim150_scaffold_1355

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1355_1
unknown

Not on your lists

2..139
DNA (138bp) protein (46aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1355_2
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

338..1414
DNA (1077bp) protein (359aa)
aminotransferase class V n=1 Tax=Brevibacterium linens RepID=UPI0000510357
class V aminotransferase
Aminotransferase class V {ECO:0000313|EMBL:ACV81072.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_1355_3
unknown

Not on your lists

comp(1407..1694)
DNA (288bp) protein (96aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1355_4
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1716..2990)
DNA (1275bp) protein (425aa)
ABC transporter permease n=1 Tax=Amycolatopsis nigrescens RepID=UPI00035F15F6
Uncharacterized protein {ECO:0000313|EMBL:AIJ23606.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
ABC transporter permease rbh
scnpilot_solids2_trim150_scaffold_1355_5
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2987..3922)
DNA (936bp) protein (312aa)
ABC transporter ATP-binding protein n=1 Tax=Frankia sp. BMG5.12 RepID=UPI00036D68D8
ABC transporter related protein {ECO:0000313|EMBL:EFC86112.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
ABC-type transporter
scnpilot_solids2_trim150_scaffold_1355_6
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3941..4432)
DNA (492bp) protein (164aa)
VanZ family protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X808_NAKMY
VanZ family protein
VanZ family protein {ECO:0000313|EMBL:ACV81011.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_1355_7
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4481..4831
DNA (351bp) protein (117aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4GZD8_CELFA
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEE44859.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
scnpilot_solids2_trim150_scaffold_1355_8
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4828..5298
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Agromyces subbeticus RepID=UPI0003B3108A
LigA protein {ECO:0000313|EMBL:EWM63485.1}; Flags: Fragment;; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1355_9
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5174..6037)
DNA (864bp) protein (288aa)
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:EWT07313.1}; EC=1.1.1.157 {ECO:0000313|EMBL:EWT07313.1};; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Streptomyces albus J1074 RepID=D6B1P3_9ACTO
3-hydroxybutyryl-CoA dehydrogenase
scnpilot_solids2_trim150_scaffold_1355_10
Arthrobacter sp. PAMC25486, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6034..6771)
DNA (738bp) protein (246aa)
short-chain dehydrogenase n=1 Tax=Yaniella halotolerans RepID=UPI0003B51A3A
Uncharacterized protein {ECO:0000313|EMBL:AIY03172.1}; TaxID=1494608 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. PAMC25486.;"
short-chain dehydrogenase/reductase SDR
scnpilot_solids2_trim150_scaffold_1355_11
Arthrobacter sp. PAMC25486, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6784..8427)
DNA (1644bp) protein (548aa)
hydrolase n=1 Tax=Yaniella halotolerans RepID=UPI0003B59E37 rbh
Uncharacterized protein {ECO:0000313|EMBL:AIY03177.1}; TaxID=1494608 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. PAMC25486.;"
amidohydrolase; K07047
scnpilot_solids2_trim150_scaffold_1355_12
Arthrobacter sp. PAMC25486, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8569..9957
DNA (1389bp) protein (463aa)
Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|SAAS:SAAS00022796}; EC=1.4.4.2 {ECO:0000256|SAAS:SAAS00022796};; TaxID=1494608 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. PAMC25486.;"
glycine dehydrogenase (EC:1.4.4.2); K00282 glycine dehydrogenase subunit 1 [EC:1.4.4.2]
glycine dehydrogenase subunit 1 n=1 Tax=Yaniella halotolerans RepID=UPI0003B6E114 rbh
scnpilot_solids2_trim150_scaffold_1355_13
Arthrobacter sp. PAMC25486, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9954..11657
DNA (1704bp) protein (568aa)
Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|SAAS:SAAS00022796}; EC=1.4.4.2 {ECO:0000256|SAAS:SAAS00022796};; TaxID=1494608 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. PAMC25486.;"
glycine dehydrogenase subunit 2 (EC:1.4.4.2); K00283 glycine dehydrogenase subunit 2 [EC:1.4.4.2]
glycine dehydrogenase subunit 2 n=1 Tax=Yaniella halotolerans RepID=UPI0003B30908 rbh
scnpilot_solids2_trim150_scaffold_1355_14
Streptomyces rubellomurinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11654..12772
DNA (1119bp) protein (373aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI000379DEC3
Uncharacterized protein {ECO:0000313|EMBL:KJS60148.1}; TaxID=359131 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rubellomurinus.;"
ATP-NAD/AcoX kinase
scnpilot_solids2_trim150_scaffold_1355_15
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12778..13551)
DNA (774bp) protein (258aa)
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; K12251 N-carbamoylputrescine amidase [EC:3.5.1.53]
nitrilase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B31CAA rbh
Uncharacterized protein {ECO:0000313|EMBL:KFG70636.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
scnpilot_solids2_trim150_scaffold_1355_16
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13734..14558)
DNA (825bp) protein (275aa)
Cyclase n=1 Tax=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) RepID=A0QZD9_MYCS2
cyclase
Cyclase {ECO:0000313|EMBL:ABK70959.1}; Putative cyclase {ECO:0000313|EMBL:AFP40356.1}; TaxID=246196 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155).;"
scnpilot_solids2_trim150_scaffold_1355_17
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14569..15624)
DNA (1056bp) protein (352aa)
ABC transporter permease n=1 Tax=Rhodococcus erythropolis RepID=UPI00036A20CB
Ribose transporter permease RbsC {ECO:0000313|EMBL:CDQ42581.1}; TaxID=1795 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum.;"
inner-membrane translocator; K10440 ribose transport system permease protein
scnpilot_solids2_trim150_scaffold_1355_18
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15660..17162)
DNA (1503bp) protein (501aa)
ABC transporter ATP-binding protein; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17]
D-ribose transporter ATP binding protein n=1 Tax=Streptomyces sp. BoleA5 RepID=UPI00036C81BC
Ribose transport ATP-binding protein RbsA {ECO:0000313|EMBL:CDQ42580.1}; TaxID=1795 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum.;"
scnpilot_solids2_trim150_scaffold_1355_19
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17162..18364)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Gordonia rhizosphera NBRC 16068 RepID=K6WXQ0_9ACTO
D-ribose transporter subunit RbsB {ECO:0000313|EMBL:CDQ42579.1}; Flags: Precursor;; TaxID=1795 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum.;"
sugar ABC transporter periplasmic protein; K10439 ribose transport system substrate-binding protein
scnpilot_solids2_trim150_scaffold_1355_20
Arthrobacter sp. PAMC25486, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18543..20090
DNA (1548bp) protein (516aa)
hypothetical protein n=1 Tax=Yaniella halotolerans RepID=UPI0003B55385
Uncharacterized protein {ECO:0000313|EMBL:AIY03178.1}; TaxID=1494608 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. PAMC25486.;"
PucR family transcriptional regulator; K09684 purine catabolism regulatory protein
scnpilot_solids2_trim150_scaffold_1355_21
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20174..20314)
DNA (141bp) protein (47aa)
molybdopterin biosynthesis MoaE protein; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-]
Molybdopterin biosynthesis MoaE protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X8U1_NAKMY
Molybdopterin biosynthesis MoaE protein {ECO:0000313|EMBL:ACV81039.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Displaying 21 items

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