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scnpilot_solids2_trim150_scaffold_4700_8

Organism: SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241

near complete RP 48 / 55 MC: 3 BSCG 47 / 51 MC: 1 ASCG 13 / 38
Location: comp(6741..7742)

Top 3 Functional Annotations

Value Algorithm Source
cobalamin biosynthesis protein CobD; K02227 adenosylcobinamide-phosphate synthase [EC:6.3.1.10] similarity KEGG
DB: KEGG
  • Identity: 57.7
  • Coverage: 300.0
  • Bit_score: 334
  • Evalue 5.10e-89
  • rbh
cobalamin biosynthesis protein CobD n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B5C757 similarity UNIREF
DB: UNIREF100
  • Identity: 56.1
  • Coverage: 326.0
  • Bit_score: 339
  • Evalue 3.80e-90
  • rbh
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.3
  • Coverage: 307.0
  • Bit_score: 336
  • Evalue 3.50e-89

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Taxonomy

Microbispora sp. ATCC PTA-5024 → Microbispora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1002
ATGCAAAGACAGGCGAGACGGCGGCATGCCGGCTGGGCGCGCGCCGCGGGCCTGGCCGCGGGCGTGATGCTCGACGCCGCCGTCGGCGACCCGCGGCGGTGGCATCCGGTGGCCGGTTTCGGTCGCGCAGCCTCCCGCGTGGAGAACCTGCTGTGGGCCGACTCCCGCGCCCGCGGAGCCGTCTTCACGTCGATATGCGTAGGGGCGAGCGTGACCGTGGGAGCGGGCCTGTCGCGGCTCGGCCGCTCGTCCGCGCTGGCCCGAACCGGCATGACGGCGCTCGCCACCTGGGCCGTCCTGGGATCGAAAAGTCTGATCTCCGAAGGGTTGTCGGTGCATCGTATGCTCGAGGCCGGCGACCTGCCGGGAGCACGGCAGCAGATCACGCACCTGGTGGGTCGCGACCCGTCGGAGCTGTCGGCGGACGAGATCGCCCGCGCCGCAGTGGAATCGGTGGCCGAGAACGCCTCCGACGCCGTGGTGGCGCCGCTCTTCTGGGGCGCCGTCGCCGGCATGCCGGGCCTTCTCGGATACCGCGCCGCCAACACGCTCGATGCCATGGTCGGCTATCGCAGCCCGCGGTTCGAACGGTTCGGGTGGGCGTCGGCCCGGCTGGACGACCTGGCCAACCTGGCCCCCTCCCGCGCGACAGCGGCTGCCGTGGCACTGATCTCGCGCTCCCCCCGCCGTACCTGGGAGGCCACCCGGCGCTTCGCCCACGCCCACCCCAGCCCCAACTCCGGATGGTGCGAGGCCGCGTATGCCGGCGCACTCGGCGTGCGGCTGGGAGGCAGCAACAGCTACGCCGGGCGCGTGGAACACCGGCCGCGGATCGGCACCGGCAGGGCCCCCGTGGCATCCGATATTCCGGCAGCGGCGCGGCTGACGAAGAGCGTCATACTCGTCACAGCGATCGCATCCGCAGCCGCCGCACCTGCGATGACGTCGCTGCTCGGGCGAGTGGGACCACATCGCCACCGCGAGCCGGGTGGGGTAGAGTGA
PROTEIN sequence
Length: 334
MQRQARRRHAGWARAAGLAAGVMLDAAVGDPRRWHPVAGFGRAASRVENLLWADSRARGAVFTSICVGASVTVGAGLSRLGRSSALARTGMTALATWAVLGSKSLISEGLSVHRMLEAGDLPGARQQITHLVGRDPSELSADEIARAAVESVAENASDAVVAPLFWGAVAGMPGLLGYRAANTLDAMVGYRSPRFERFGWASARLDDLANLAPSRATAAAVALISRSPRRTWEATRRFAHAHPSPNSGWCEAAYAGALGVRLGGSNSYAGRVEHRPRIGTGRAPVASDIPAAARLTKSVILVTAIASAAAAPAMTSLLGRVGPHRHREPGGVE*