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scnpilot_solids2_trim150_scaffold_5172_14

Organism: SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241

near complete RP 48 / 55 MC: 3 BSCG 47 / 51 MC: 1 ASCG 13 / 38
Location: 10612..11418

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L17 n=1 Tax=Gordonia effusa NBRC 100432 RepID=H0R4B1_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 63.7
  • Coverage: 262.0
  • Bit_score: 307
  • Evalue 1.70e-80
  • rbh
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=592678 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis halophila YIM 93223.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.8
  • Coverage: 269.0
  • Bit_score: 322
  • Evalue 7.20e-85
50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 similarity KEGG
DB: KEGG
  • Identity: 56.7
  • Coverage: 261.0
  • Bit_score: 265
  • Evalue 2.30e-68

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Taxonomy

Amycolatopsis halophila → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 807
ATGCCCACCCCGACCAAGGGTCCCCGTCTGGGCGGTTCACCCGCGCACGAGCGGCTGATCCTGGCCAACCTGGCCCAGTCCTTGTTTGAACACGGCAAGATCACCACGACGCTGGCCAAGGCCAAGCGACTGCGTCCCGTGGCGGAGAAGCTGGTGACCGCCGCGAAGCGGGGCACCCTGCACTCCCGTCGCCTGGTGCTCAAGACCATCCACGACAAGGACGTCGTGCACAAGCTGTTCGCGGAGATCGGCCCGTCGTTCGCCACCCGCGAGGGCGGCTACCTGCGGATCACCAAGACGATGCCCCGCAAGGGCGACAACGCGCCCATGGCGGTCGTCGAGCTGATCGGCGAGGAGACGGTGTCGTCGGCGGCATCGCGCGTGGCCCGCGTGGCCGCGTCCAGGAAGAAGGCCGCCGAGACGAAGGCTGCCGATGCGAAGCCGGCCGATGCGAAGCAGGCTGATGCGCCCGCCGAGGCGAGTGCCGATGCGCCCGCCGAGGTCGCATCCGAGTCGCCGGCAGGCGCCGCCGCCGATGTCGTCGAGGTCGAGGAATCGGCCTCGACGGACGATGCGCCGTACGGTGCAGGTTCGCATGCGGCGCTGGAGGACGGCTCCCAGCCGGACGGCTTCCCGATCAAGGGCAACGCCGACTCGATGCTGTACCACGTGCCGGGCAGCTCGCACTACGACCGCACGGTGGCCGAAGTATGGTTCGCCGATGCGGATGCCGCCGAAGCCGCAGGCTTCCAGCTGCCCCCGTCGCAGCGGGAGGACGGCGACGCGGGGTCCGCGGACTCCGAGTAG
PROTEIN sequence
Length: 269
MPTPTKGPRLGGSPAHERLILANLAQSLFEHGKITTTLAKAKRLRPVAEKLVTAAKRGTLHSRRLVLKTIHDKDVVHKLFAEIGPSFATREGGYLRITKTMPRKGDNAPMAVVELIGEETVSSAASRVARVAASRKKAAETKAADAKPADAKQADAPAEASADAPAEVASESPAGAAADVVEVEESASTDDAPYGAGSHAALEDGSQPDGFPIKGNADSMLYHVPGSSHYDRTVAEVWFADADAAEAAGFQLPPSQREDGDAGSADSE*