ggKbase home page

scnpilot_solids2_trim150_scaffold_5172

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_5172_1
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

98..1120
DNA (1023bp) protein (341aa)
Putative luciferase-like monooxygenase n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W9H0_9ACTO rbh
putative luciferase-like monooxygenase rbh
Putative luciferase-like monooxygenase {ECO:0000313|EMBL:AGZ44620.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
scnpilot_solids2_trim150_scaffold_5172_2
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1171..2829
DNA (1659bp) protein (553aa)
Uncharacterized protein n=1 Tax=Arthrobacter sp. AK-YN10 RepID=U1YB19_9MICC rbh
MFS transporter {ECO:0000313|EMBL:KDA04699.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
putative transporter; K03321 sulfate permease, SulP family rbh
scnpilot_solids2_trim150_scaffold_5172_3
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2967..4253
DNA (1287bp) protein (429aa)
enolase (EC:4.2.1.11); K01689 enolase [EC:4.2.1.11] rbh
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Enolase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XKR0_NAKMY rbh
scnpilot_solids2_trim150_scaffold_5172_4
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4347..4814
DNA (468bp) protein (156aa)
Septum formation initiator n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XKQ9_NAKMY
septum formation initiator
Septum formation initiator {ECO:0000313|EMBL:ACV80716.1}; Flags: Precursor;; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_5172_5
Mycobacterium xenopi, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4818..5333
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Mycobacterium xenopi RIVM700367 RepID=I0RGC5_MYCXE
hypothetical protein; K09009 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EID10178.1}; TaxID=1150591 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium xenopi RIVM700367.;"
scnpilot_solids2_trim150_scaffold_5172_6
Streptomyces rubellomurinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5501..6124
DNA (624bp) protein (208aa)
Pit accessory protein n=1 Tax=Longispora albida RepID=UPI00036B6EBF
Phosphate transport regulator {ECO:0000313|EMBL:KJS56879.1}; TaxID=1615590 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rubellomurinus subsp. indigoferus.;"
putative Pit accessory protein; K07220 hypothetical protein
scnpilot_solids2_trim150_scaffold_5172_7
Gordonia rubripertincta, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6133..7119
DNA (987bp) protein (329aa)
Low-affinity inorganic phosphate transporter n=1 Tax=Gordonia namibiensis NBRC 108229 RepID=K6X4W1_9ACTO rbh
Inorganic phosphate transporter {ECO:0000313|EMBL:GAB86204.1}; TaxID=1077975 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rubripertincta NBRC 101908.;"
phosphate transporter; K03306 inorganic phosphate transporter, PiT family rbh
scnpilot_solids2_trim150_scaffold_5172_8
Dietzia sp. UCD-THP, Dietzia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7368..7589
DNA (222bp) protein (74aa)
translation initiation factor IF-1 n=1 Tax=Dietzia RepID=UPI00029A86C0
translation initiation factor IF-1; K02518 translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1292020 species="Bacteria; Actinobacteria; Corynebacteriales; Dietziaceae; Dietzia.;" source="Dietzia sp. UCD-THP.;"
scnpilot_solids2_trim150_scaffold_5172_9
Actinomyces neuii, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7687..7800
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=1 Tax=Actinomyces neuii BVS029A5 RepID=K0YUN0_9ACTO
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=888439 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces neuii BVS029A5.;"
rpmJ; 50S ribosomal protein L36; K02919 large subunit ribosomal protein L36
scnpilot_solids2_trim150_scaffold_5172_10
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


8008..8385
DNA (378bp) protein (126aa)
30S ribosomal protein S13 n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XCL1_NAKMY
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_5172_11
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


8526..8681
DNA (156bp) protein (52aa)
30S ribosomal protein S11 n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XCL2_NAKMY
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_5172_12
Tetrasphaera australiensis, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


8713..9318
DNA (606bp) protein (202aa)
30S ribosomal protein S4 n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XCL3_NAKMY
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1193182 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera australiensis Ben110.;"
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4
scnpilot_solids2_trim150_scaffold_5172_13
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9518..10546
DNA (1029bp) protein (343aa)
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera mult
DNA-directed RNA polymerase subunit alpha n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XCL4_NAKMY
scnpilot_solids2_trim150_scaffold_5172_14
Amycolatopsis halophila, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


10612..11418
DNA (807bp) protein (269aa)
50S ribosomal protein L17 n=1 Tax=Gordonia effusa NBRC 100432 RepID=H0R4B1_9ACTO rbh
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=592678 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis halophila YIM 93223.;"
50S ribosomal protein L17; K02879 large subunit ribosomal protein L17
scnpilot_solids2_trim150_scaffold_5172_15
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11833..12249
DNA (417bp) protein (139aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
tRNA pseudouridine synthase A (EC:5.4.99.12); K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
tRNA pseudouridine synthase A n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XCL6_NAKMY
scnpilot_solids2_trim150_scaffold_5172_16
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


12609..13052
DNA (444bp) protein (148aa)
50S ribosomal protein L13 n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XCL8_NAKMY
50S ribosomal protein L13; K02871 large subunit ribosomal protein L13
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_5172_17
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


13049..13672
DNA (624bp) protein (208aa)
30S ribosomal protein S9 n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XCL9_NAKMY
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9
scnpilot_solids2_trim150_scaffold_5172_18
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13672..14364
DNA (693bp) protein (231aa)
phosphoglucosamine mutase (EC:5.4.2.10); K03431 phosphoglucosamine mutase [EC:5.4.2.10]
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|SAAS:SAAS00078319}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|SAAS:SAAS00078300};; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Phosphoglucosamine mutase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XCM0_NAKMY
scnpilot_solids2_trim150_scaffold_5172_19

Not on your lists

14361..14993
DNA (633bp) protein (211aa)
glmM; phosphoglucosamine mutase; K03431 phosphoglucosamine mutase [EC:5.4.2.10]
Phosphoglucosamine mutase n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RM01_BLASD
Uncharacterized protein {ECO:0000313|EMBL:KGA17632.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
scnpilot_solids2_trim150_scaffold_5172_20
unknown

Not on your lists

comp(15021..15446)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Ruania albidiflava RepID=UPI0003B426A5
scnpilot_solids2_trim150_scaffold_5172_21
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15580..16407)
DNA (828bp) protein (276aa)
Dienelactone hydrolase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XCM1_NAKMY
dienelactone hydrolase
Dienelactone hydrolase {ECO:0000313|EMBL:ACV77586.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_5172_22
Streptomyces sp. CNQ-509, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16590..17327
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Streptomyces RepID=UPI000363777D
Hydrolase {ECO:0000313|EMBL:AKH83629.1}; TaxID=444103 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. CNQ-509.;"
two-component system sensor protein
scnpilot_solids2_trim150_scaffold_5172_23
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17506..17970
DNA (465bp) protein (155aa)
glmS; glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16); K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16]
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_0016
glutamine amidotransferase n=1 Tax=Saccharopolyspora spinosa RepID=UPI000237A8BC
scnpilot_solids2_trim150_scaffold_5172_24
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18002..19303
DNA (1302bp) protein (434aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_0016
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Amycolatopsis orientalis HCCB10007 RepID=R4SI35_AMYOR
glmS; glucosamine--fructose-6-phosphate aminotransferase (isomerizing)
scnpilot_solids2_trim150_scaffold_5172_25
Streptomyces cattleya, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19320..19772
DNA (453bp) protein (151aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237208}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF_00101};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000256|HAMAP-Rule:MF_00101}; TaxID=1003195 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC; 14057 / NRRL 8057).;"
Holo-[acyl-carrier-protein] synthase n=1 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8JZB3_STREN
holo-ACP synthase
scnpilot_solids2_trim150_scaffold_5172_26
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19915..21048
DNA (1134bp) protein (378aa)
Carbohydrate kinase, YjeF related protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XCN1_NAKMY
carbohydrate kinase
Carbohydrate kinase, YjeF related protein {ECO:0000313|EMBL:ACV77596.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Displaying 26 items

View Taxonomy