ggKbase home page

scnpilot_solids2_trim150_scaffold_2606

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2606_1
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(1..468)
DNA (468bp) protein (156aa)
GHMP kinase; K07031 D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168]
GHMP kinase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZR5_OPITP
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
scnpilot_solids2_trim150_scaffold_2606_2
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(474..1187)
DNA (714bp) protein (238aa)
nucleotidyl transferase; K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HQY3_9EURY
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
scnpilot_solids2_trim150_scaffold_2606_3
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(1216..2166)
DNA (951bp) protein (317aa)
Helix-turn-helix type 11 domain protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CSK3_TRURR
helix-turn-helix domain-containing protein
Helix-turn-helix type 11 domain protein {ECO:0000313|EMBL:ADI15423.1}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
scnpilot_solids2_trim150_scaffold_2606_4
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(2230..2991)
DNA (762bp) protein (254aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AZ76_HERA2
short-chain dehydrogenase/reductase SDR
Tax=BJP_IG2102_Coriobacteriales_64_17
scnpilot_solids2_trim150_scaffold_2606_5
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

Not on your lists

3227..5716
DNA (2490bp) protein (830aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-O11 RepID=UPI00036BBB17 rbh
Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
scnpilot_solids2_trim150_scaffold_2606_6
Marinithermus hydrothermalis, Marinithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(5768..6418)
DNA (651bp) protein (217aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NQ07_MARHT
LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEB11108.1}; TaxID=869210 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Marinithermus.;" source="Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1).;"
scnpilot_solids2_trim150_scaffold_2606_7
Marinithermus hydrothermalis, Marinithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(6427..7056)
DNA (630bp) protein (210aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=869210 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Marinithermus.;" source="Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1).;"
Histidine kinase n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NQ08_MARHT
histidine kinase
scnpilot_solids2_trim150_scaffold_2606_8
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(7103..7690)
DNA (588bp) protein (196aa)
Putative universal stress protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I2S3_CALAS
putative universal stress protein
Putative universal stress protein {ECO:0000313|EMBL:BAL99560.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
scnpilot_solids2_trim150_scaffold_2606_9
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(7727..8179)
DNA (453bp) protein (151aa)
Universal stress protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CQC9_TRURR
UspA domain-containing protein
UspA domain protein {ECO:0000313|EMBL:ADI14913.1}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
scnpilot_solids2_trim150_scaffold_2606_10
Marinithermus hydrothermalis, Marinithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

8362..9195
DNA (834bp) protein (278aa)
UspA domain-containing protein n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NPX5_MARHT
UspA domain-containing protein
UspA domain-containing protein {ECO:0000313|EMBL:AEB11076.1}; TaxID=869210 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Marinithermus.;" source="Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1).;"
scnpilot_solids2_trim150_scaffold_2606_11
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9115..10779)
DNA (1665bp) protein (555aa)
pgm; phosphoglucomutase; K01835 phosphoglucomutase [EC:5.4.2.2]
Phosphoglucomutase n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XU08_DESMR
Phosphoglucomutase {ECO:0000313|EMBL:BAH76030.1}; TaxID=573370 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1).;"
scnpilot_solids2_trim150_scaffold_2606_12
Methanocella arvoryzae, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

11095..12621
DNA (1527bp) protein (509aa)
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1); K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1]
K(+)-insensitive pyrophosphate-energized proton pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129, ECO:0000313|EMBL:CAJ35777.1};; Membrane-bound proton-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; TaxID=351160 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella arvoryzae (strain DSM 22066 / NBRC 105507
K(+)-insensitive pyrophosphate-energized proton pump n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W766_UNCMA
Displaying 12 items

View Taxonomy