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scnpilot_solids2_trim150_scaffold_2753

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2753_trna_1
unknown

Not on your lists

9..82
DNA (74bp)
transferRNA Arg
scnpilot_solids2_trim150_scaffold_2753_1
Ochrobactrum sp. CDB2, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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105..512
DNA (408bp) protein (136aa)
Putative fluoride ion transporter CrcB n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3KFS1_9RHIZ
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=360313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. CDB2.;"
CrcB protein; K06199 CrcB protein
scnpilot_solids2_trim150_scaffold_2753_2
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(553..1080)
DNA (528bp) protein (176aa)
Lipoprotein LpqB, GerMN domain protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CX93_TRURR
lipoprotein LpqB, GerMN domain-containing protein
Lipoprotein LpqB, GerMN domain protein {ECO:0000313|EMBL:ADI13217.1}; Flags: Precursor;; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
scnpilot_solids2_trim150_scaffold_2753_3
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1087..2790)
DNA (1704bp) protein (568aa)
Malate dehydrogenase {ECO:0000313|EMBL:KFA91750.1}; EC=1.1.1.38 {ECO:0000313|EMBL:KFA91750.1};; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
malic protein NAD-binding protein; K00027 malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] rbh
Malic protein NAD-binding protein n=1 Tax=Thermus thermophilus (strain SG0.5JP17-16) RepID=F6DEJ2_THETG rbh
scnpilot_solids2_trim150_scaffold_2753_4
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(2868..4430)
DNA (1563bp) protein (521aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CX92_TRURR
hypothetical protein
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ADI13216.1}; Flags: Precursor;; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
scnpilot_solids2_trim150_scaffold_2753_5
Oceanithermus profundus, Oceanithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(4406..4837)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U4X9_OCEP5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADR37329.1}; Flags: Precursor;; TaxID=670487 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Oceanithermus.;" source="Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 /; 506).;"
scnpilot_solids2_trim150_scaffold_2753_6
Meiothermus ruber, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists


5060..6262
DNA (1203bp) protein (401aa)
UPI000346AACB related cluster n=1 Tax=unknown RepID=UPI000346AACB
signal recognition particle protein
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=504728 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21); (Thermus ruber).;"
scnpilot_solids2_trim150_scaffold_2753_7
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists


6419..6730
DNA (312bp) protein (104aa)
30S ribosomal protein S16 n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CX90_TRURR
30S ribosomal protein S16; K02959 small subunit ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; Flags: Precursor;; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
scnpilot_solids2_trim150_scaffold_2753_8
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

6759..6989
DNA (231bp) protein (77aa)
UPF0109 protein Trad_0070 n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CX89_TRURR
hypothetical protein; K06960
UPF0109 protein Trad_0070 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
scnpilot_solids2_trim150_scaffold_2753_9
unknown

Not on your lists

7006..7455
DNA (450bp) protein (150aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2753_10
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

7468..8211
DNA (744bp) protein (248aa)
tRNA (guanine-N1)-methyltransferase; K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] rbh
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CX87_TRURR rbh
scnpilot_solids2_trim150_scaffold_2753_11
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(8218..8718)
DNA (501bp) protein (167aa)
Outer membrane chaperone Skp (OmpH) n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CX86_TRURR
outer membrane chaperone Skp; K06142 outer membrane protein
Outer membrane chaperone Skp (OmpH) {ECO:0000313|EMBL:ADI13210.1}; Flags: Precursor;; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
scnpilot_solids2_trim150_scaffold_2753_12
'Deinococcus soli' Cha et al. 2014, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

8820..9977
DNA (1158bp) protein (386aa)
prepilin peptidase; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] rbh
Putative Prepilin peptidase (Type 4 prepilin-like proteins leader peptide-processing enzyme) (Peptidase A24A-like protein) n=1 Tax=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) RepID=C1CYV7_DEIDV rbh
Peptidase A24 {ECO:0000313|EMBL:AKH17412.1}; TaxID=1309411 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="'Deinococcus soli' Cha et al. 2014.;"
scnpilot_solids2_trim150_scaffold_2753_13
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

10116..11057
DNA (942bp) protein (314aa)
ornithine carbamoyltransferase; K00611 ornithine carbamoyltransferase [EC:2.1.3.3] rbh
Ornithine carbamoyltransferase, catabolic {ECO:0000256|HAMAP-Rule:MF_01109}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109};; Flags: Precursor;; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
Ornithine carbamoyltransferase n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CX83_TRURR rbh
scnpilot_solids2_trim150_scaffold_2753_14
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

11064..12176
DNA (1113bp) protein (371aa)
N-acetyl-gamma-glutamyl-phosphate reductase; K00145 N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] rbh
N-acetyl-gamma-glutamyl-phosphate/N-acetyl-gamma-aminoadipyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150};; N-acetyl-glutamate semialdehyde/N-acetyl-aminoadipate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; Flags: Precursor;; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686
N-acetyl-gamma-glutamyl-phosphate/N-acetyl-gamma-aminoadipyl-phosphate reductase n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CX82_TRURR rbh
scnpilot_solids2_trim150_scaffold_2753_15
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

12205..13353
DNA (1149bp) protein (383aa)
arginine biosynthesis bifunctional protein ArgJ; K00620 glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] rbh
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CX81_TRURR rbh
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; Flags: Precursor;; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
scnpilot_solids2_trim150_scaffold_2753_16
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(13450..14844)
DNA (1395bp) protein (465aa)
dihydrolipoamide dehydrogenase; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] rbh
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
Dihydrolipoyl dehydrogenase n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CRE3_TRURR rbh
scnpilot_solids2_trim150_scaffold_2753_17

Not on your lists

comp(15010..15507)
DNA (498bp) protein (166aa)
AMP-dependent synthetase and ligase n=1 Tax=Alicyclobacillus hesperidum URH17-3-68 RepID=J9E3M4_9BACL
Uncharacterized protein {ECO:0000313|EMBL:KKK56053.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
scnpilot_solids2_trim150_scaffold_2753_18
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(15459..16253)
DNA (795bp) protein (265aa)
hypothetical protein id=14632345 bin=bin9_gal15 species=Ureibacillus thermosphaericus genus=Ureibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
Tax=CSP1_3_Armatimonadetes
scnpilot_solids2_trim150_scaffold_2753_19
unknown

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comp(16387..16872)
DNA (486bp) protein (162aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2753_20
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(16979..18217)
DNA (1239bp) protein (413aa)
FAD dependent oxidoreductase; K00285 D-amino-acid dehydrogenase [EC:1.4.99.1] rbh
FAD dependent oxidoreductase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C690_SPHTD rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:ACZ37628.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
scnpilot_solids2_trim150_scaffold_2753_21
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists


18645..19601
DNA (957bp) protein (319aa)
leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase [EC:6.1.1.4]
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
Leucine--tRNA ligase n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CRE6_TRURR
Displaying 22 items

View Taxonomy