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SCNPILOT_SOLID2_TRIM150_Truepera_66_81

SCNPILOT_SOLID2_TRIM150_Truepera_radiovictrix_66_81
In projects: SCNPILOT_SOLID2_TRIM150

Consensus taxonomy: Truepera radiovictrix  →  Truepera  →  Deinococcales  →  Deinococci  →  Deinococcus-Thermus  →  Bacteria

Displaying items 151-200 of 263 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
scnpilot_solids2_trim150_scaffold_17424
Species: Truepera radiovictrix (66.67%)
6 3910 bp 66.70 81.60 96.45
scnpilot_solids2_trim150_scaffold_21282
Species: Truepera radiovictrix (100%)
2 1287 bp 66.51 81.70 100.23
scnpilot_solids2_trim150_scaffold_4318
Species: Truepera radiovictrix (57.14%)
7 8152 bp 66.62 81.73 95.90
scnpilot_solids2_trim150_scaffold_6784
Species: Truepera radiovictrix (100%)
2 3220 bp 66.68 81.75 96.89
scnpilot_solids2_trim150_scaffold_23017
Species: Truepera radiovictrix (50%)
2 1215 bp 66.75 81.85 89.88
scnpilot_solids2_trim150_scaffold_8410
Species: Truepera radiovictrix (75%)
4 2635 bp 65.43 81.86 96.32
scnpilot_solids2_trim150_scaffold_16698
Species: Truepera radiovictrix (50%)
4 1545 bp 66.60 82.04 96.50
scnpilot_solids2_trim150_scaffold_11232
Species: Truepera radiovictrix (100%)
3 3010 bp 69.70 82.13 91.00
scnpilot_solids2_trim150_scaffold_3377
Class: Deinococci (50%)
22 19671 bp 65.32 82.17 94.81
scnpilot_solids2_trim150_scaffold_3425
Class: Deinococci (55.56%)
9 6986 bp 71.89 82.19 96.24
scnpilot_solids2_trim150_scaffold_6410
Species: Truepera radiovictrix (60%)
5 4200 bp 66.83 82.21 95.07
scnpilot_solids2_trim150_scaffold_6488
Class: Deinococci (60%)
5 5476 bp 64.59 82.23 85.68
scnpilot_solids2_trim150_scaffold_20630
Species: Truepera radiovictrix (50%)
8 4600 bp 65.91 82.27 85.24
scnpilot_solids2_trim150_scaffold_972
Species: Truepera radiovictrix (63.33%)
60 60437 bp 65.51 82.35 90.82
scnpilot_solids2_trim150_scaffold_22543
Species: Truepera radiovictrix (100%)
1 1234 bp 65.88 82.41 79.98
scnpilot_solids2_trim150_scaffold_10181
Species: Truepera radiovictrix (66.67%)
3 2260 bp 68.50 82.43 92.65
scnpilot_solids2_trim150_scaffold_21034
Species: Marinithermus hydrothermalis (100%)
2 1299 bp 67.98 82.45 97.92
scnpilot_solids2_trim150_scaffold_5800
Order: Deinococcales (57.14%)
7 6114 bp 63.58 82.46 73.50
scnpilot_solids2_trim150_scaffold_20792
Species: Truepera radiovictrix (50%)
4 2510 bp 65.74 82.47 91.91
scnpilot_solids2_trim150_scaffold_4502
Species: Truepera radiovictrix (50%)
4 5488 bp 67.44 82.57 97.41
scnpilot_solids2_trim150_scaffold_3531
Species: Truepera radiovictrix (83.33%)
7 8133 bp 62.23 82.57 65.47
scnpilot_solids2_trim150_scaffold_21442
Species: Truepera radiovictrix (50%)
2 1280 bp 66.88 82.73 93.98
scnpilot_solids2_trim150_scaffold_3449
Class: Deinococci (50%)
8 7865 bp 68.24 82.73 96.69
scnpilot_solids2_trim150_scaffold_3405
Species: Truepera radiovictrix (100%)
5 7931 bp 66.16 82.90 95.62
scnpilot_solids2_trim150_scaffold_16259
Species: Truepera radiovictrix (60%)
5 4201 bp 66.98 83.02 79.20
scnpilot_solids2_trim150_scaffold_12935
Species: Truepera radiovictrix (100%)
2 1873 bp 67.54 83.05 99.31
scnpilot_solids2_trim150_scaffold_14915
Species: Truepera radiovictrix (66.67%)
3 2248 bp 64.46 83.07 71.93
scnpilot_solids2_trim150_scaffold_5083
Class: Deinococci (50%)
4 4827 bp 64.39 83.10 94.47
scnpilot_solids2_trim150_scaffold_12401
Species: Deinococcus gobiensis (50%)
2 1934 bp 63.75 83.14 76.01
scnpilot_solids2_trim150_scaffold_14180
Order: Deinococcales (57.14%)
7 6551 bp 65.53 83.21 79.36
scnpilot_solids2_trim150_scaffold_3601
Order: Deinococcales (50%)
12 9377 bp 65.67 83.25 88.56
scnpilot_solids2_trim150_scaffold_20654
Species: Truepera radiovictrix (100%)
1 1318 bp 64.57 83.31 99.70
scnpilot_solids2_trim150_scaffold_3324
Species: Truepera radiovictrix (85.71%)
7 8888 bp 65.09 83.32 86.00
scnpilot_solids2_trim150_scaffold_6820
Species: Truepera radiovictrix (75%)
4 3208 bp 62.62 83.46 92.11
scnpilot_solids2_trim150_scaffold_8013
Species: Truepera radiovictrix (57.14%)
8 6417 bp 64.80 83.52 95.34
scnpilot_solids2_trim150_scaffold_11776
Species: Truepera radiovictrix (66.67%)
3 2009 bp 69.74 83.70 100.20
scnpilot_solids2_trim150_scaffold_10329
Class: Deinococci (66.67%)
3 2234 bp 67.37 83.73 86.62
scnpilot_solids2_trim150_scaffold_11663
Species: Truepera radiovictrix (66.67%)
3 2026 bp 66.34 83.74 99.51
scnpilot_solids2_trim150_scaffold_5990
Species: Marinithermus hydrothermalis (100%)
5 5334 bp 67.23 83.77 95.67
scnpilot_solids2_trim150_scaffold_9811
Species: Truepera radiovictrix (88.89%)
9 5299 bp 63.62 83.87 80.96
scnpilot_solids2_trim150_scaffold_36113
Species: Truepera radiovictrix (80%)
5 2516 bp 67.65 83.88 99.32
scnpilot_solids2_trim150_scaffold_7434
Class: Deinococci (62.5%)
10 5753 bp 66.07 83.93 91.92
scnpilot_solids2_trim150_scaffold_5774
Class: Deinococci (55.56%)
9 8025 bp 66.13 83.94 85.31
scnpilot_solids2_trim150_scaffold_3416
Species: Truepera radiovictrix (77.42%)
31 29173 bp 65.48 83.95 92.08
scnpilot_solids2_trim150_scaffold_11536
Species: Truepera radiovictrix (66.67%)
3 2509 bp 68.95 84.00 97.21
scnpilot_solids2_trim150_scaffold_4548
Class: Deinococci (50%)
18 16104 bp 66.35 84.03 87.18
scnpilot_solids2_trim150_scaffold_9600
Species: Truepera radiovictrix (75%)
4 4112 bp 66.15 84.08 93.24
scnpilot_solids2_trim150_scaffold_2509
Species: Truepera radiovictrix (84.62%)
13 20012 bp 66.60 84.35 93.05
scnpilot_solids2_trim150_scaffold_7134
Order: Deinococcales (66.67%)
3 3068 bp 65.58 84.39 96.61
scnpilot_solids2_trim150_scaffold_2606
Domain: Bacteria (91.67%)
12 12623 bp 67.81 84.42 92.95
Displaying items 151-200 of 263 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.