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scnpilot_solids2_trim150_scaffold_34

Search features with annotation key words

Displaying items 1-30 of 164 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_34_1
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(400..1764)
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L3S4_HALH1 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEE48678.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_solids2_trim150_scaffold_34_2
unknown

Not on your lists

comp(2058..2489)
DNA (432bp) protein (144aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_34_3
unknown

Not on your lists

comp(2526..2996)
DNA (471bp) protein (157aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_34_4
unknown

Not on your lists

comp(3067..3426)
DNA (360bp) protein (120aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_34_5
unknown

Not on your lists

comp(3647..3736)
DNA (90bp) protein (30aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_34_6
unknown

Not on your lists

4205..4873
DNA (669bp) protein (223aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_34_7
unknown

Not on your lists

4937..5533
DNA (597bp) protein (199aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_34_8
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

5491..6243
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI000373DDFA
putative signal transduction histidine kinase
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_34_9
Myroides odoratus, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6233..6910
DNA (678bp) protein (226aa)
Two component transcriptional regulator, LuxR family n=2 Tax=Myroides RepID=H1ZCB1_MYROD
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:EHQ44421.1}; TaxID=929704 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides odoratus DSM 2801.;"
LuxR family two component transcriptional regulator
scnpilot_solids2_trim150_scaffold_34_10
Pseudoalteromonas luteoviolacea, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7802..9124
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Pseudoalteromonas luteoviolacea 2ta16 RepID=V4HVU1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ESP92069.1}; TaxID=1353533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas luteoviolacea 2ta16.;"
ferritin-like protein
scnpilot_solids2_trim150_scaffold_34_11
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9147..10916
DNA (1770bp) protein (590aa)
Uncharacterized protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FBC0_FLAJ1 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFF08883.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_34_12
Pseudoalteromonas piscicida, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10922..13285
DNA (2364bp) protein (788aa)
Monoamine oxidase n=1 Tax=Pseudoalteromonas piscicida JCM 20779 RepID=U1KDB9_PSEO7
Amine oxidoreductase {ECO:0000313|EMBL:KJY86163.1}; TaxID=43662 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas piscicida.;"
amine oxidase
scnpilot_solids2_trim150_scaffold_34_13
Pseudoalteromonas luteoviolacea, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13304..15220
DNA (1917bp) protein (639aa)
indole-3-pyruvate decarboxylase; K04103 indolepyruvate decarboxylase [EC:4.1.1.74]
Pyruvate decarboxylase related thiamine pyrophosphate-requiring enzyme n=1 Tax=Pseudoalteromonas luteoviolacea 2ta16 RepID=V4I041_9GAMM rbh
Pyruvate decarboxylase related thiamine pyrophosphate-requiring enzyme {ECO:0000313|EMBL:ESP95403.1}; TaxID=1353533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas luteoviolacea 2ta16.;"
scnpilot_solids2_trim150_scaffold_34_14
Kordia algicida, Kordia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15286..17019
DNA (1734bp) protein (578aa)
FAD linked oxidase domain protein n=1 Tax=Kordia algicida OT-1 RepID=A9E0H6_9FLAO
FAD linked oxidase domain protein {ECO:0000313|EMBL:EDP95857.1}; TaxID=391587 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Kordia.;" source="Kordia algicida OT-1.;"
FAD linked oxidase
scnpilot_solids2_trim150_scaffold_34_15
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17506..18408
DNA (903bp) protein (301aa)
gliding motility protein GldA (EC:3.6.3.25); K09687 antibiotic transport system ATP-binding protein rbh
Protein involved in gliding motility GldA {ECO:0000313|EMBL:AEA44300.1}; EC=3.6.3.25 {ECO:0000313|EMBL:AEA44300.1};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
Protein involved in gliding motility GldA n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBJ2_FLUTR rbh
scnpilot_solids2_trim150_scaffold_34_16
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18410..19708
DNA (1299bp) protein (433aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00009759}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
tyrosyl-tRNA synthetase (EC:6.1.1.1); K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1] rbh
Tyrosine--tRNA ligase n=1 Tax=Flavobacterium sp. F52 RepID=J0RZZ7_9FLAO rbh
scnpilot_solids2_trim150_scaffold_34_17
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(19768..20337)
DNA (570bp) protein (190aa)
Transferase hexapeptide repeat containing protein {ECO:0000313|EMBL:AHM61773.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
Transferase hexapeptide repeat containing protein id=4161598 bin=GWF2_Bacteroidetes_41_31 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
transferase hexapeptide repeat containing protein rbh
scnpilot_solids2_trim150_scaffold_34_18
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20447..21439)
DNA (993bp) protein (331aa)
UDP-glucuronate decarboxylase (EC:4.1.1.35); K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] rbh
UDP-glucuronate decarboxylase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I989_FLUTR rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_34_19
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21436..22752)
DNA (1317bp) protein (439aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22); K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] rbh
Nucleotide sugar dehydrogenase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I988_FLUTR rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_34_20
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22767..23882)
DNA (1116bp) protein (372aa)
Pleiotropic regulatory protein n=1 Tax=Niabella aurantiaca RepID=UPI000365791A rbh
Pleiotropic regulatory protein {ECO:0000313|EMBL:KIC90363.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
glutamine--scyllo-inositol transaminase
scnpilot_solids2_trim150_scaffold_34_21
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23999..25816)
DNA (1818bp) protein (606aa)
Tetratricopeptide TPR_3 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJQ3_FLUTR rbh
hypothetical protein rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_34_22
unknown

Not on your lists

comp(25813..26337)
DNA (525bp) protein (175aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_34_23
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26398..28176)
DNA (1779bp) protein (593aa)
Butyryl-CoA dehydrogenase (EC:1.3.99.2) rbh
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:AEA44335.1}; EC=1.3.8.1 {ECO:0000313|EMBL:AEA44335.1};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
Butyryl-CoA dehydrogenase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IC89_FLUTR rbh
scnpilot_solids2_trim150_scaffold_34_24
unknown

Not on your lists

28286..28432
DNA (147bp) protein (49aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_34_25
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28443..31112)
DNA (2670bp) protein (890aa)
PKD domain containing protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAE7_FLUTR rbh
PKD domain-containing protein rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_34_26
Flavobacterium reichenbachii, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31193..32008)
DNA (816bp) protein (272aa)
epimerase n=1 Tax=Flavobacterium sp. WG21 RepID=UPI0003463EF6
Epimerase {ECO:0000313|EMBL:KFF07534.1}; TaxID=362418 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium reichenbachii.;"
NAD-dependent epimerase/dehydratase
scnpilot_solids2_trim150_scaffold_34_27
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

32166..33170
DNA (1005bp) protein (335aa)
Cytochrome oxidase assembly n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAE1_FLUTR rbh
cytochrome oxidase assembly; K02259 cytochrome c oxidase assembly protein subunit 15 rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_34_trna_1
unknown

Not on your lists

33242..33315
DNA (74bp)
transferRNA Met
scnpilot_solids2_trim150_scaffold_34_28
unknown

Not on your lists

comp(33261..33461)
DNA (201bp) protein (67aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_34_29
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33594..34784
DNA (1191bp) protein (397aa)
Tetratricopeptide TPR_2 repeat-containing protein id=3855414 bin=GWF2_Bacteroidetes_43_11 species=Cellulophaga algicola genus=Cellulophaga taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes rbh
hypothetical protein
Tax=GWF2_Bacteroidetes_43_11_curated
Displaying items 1-30 of 164 in total

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