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scnpilot_solids2_trim150_scaffold_212

Search features with annotation key words

Displaying items 1-30 of 84 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_212_16S_1
unknown

Not on your lists

comp(2..1363)
DNA (1362bp)
16S ribosomal RNA (16S rRNA)
scnpilot_solids2_trim150_scaffold_212_1
unknown

Not on your lists

1408..1602
DNA (195bp) protein (65aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_212_2
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1590..1895)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IID1_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_212_3
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1892..2977)
DNA (1086bp) protein (362aa)
DNA replication and repair protein RecF n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IID0_FLUTR rbh
DNA replication and repair protein recF; K03629 DNA replication and repair protein RecF rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_212_4
unknown

Not on your lists

comp(2977..3300)
DNA (324bp) protein (108aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_212_5
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3297..3917)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHN3_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA44811.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_212_6
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3914..4594)
DNA (681bp) protein (227aa)
O-methyltransferase family 3 n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EYA5_EMTOG
O-methyltransferase family 3
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_212_7
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4662..5150
DNA (489bp) protein (163aa)
tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKF1_FLUTR
tRNA/rRNA methyltransferase SpoU
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_212_8
unknown

Not on your lists

5199..5567
DNA (369bp) protein (123aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_212_9
unknown

Not on your lists

5605..5970
DNA (366bp) protein (122aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_212_10
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6040..6750)
DNA (711bp) protein (237aa)
Probable transcriptional regulatory protein Fluta_1167 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IB76_FLUTR rbh
hypothetical protein rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_212_11
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6909..7253
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI000364F230
hypothetical protein
Tax=GWB2_Bacteroidetes_41_8_curated
scnpilot_solids2_trim150_scaffold_212_12
unknown

Not on your lists

7246..7638
DNA (393bp) protein (131aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_212_13
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7644..8633)
DNA (990bp) protein (330aa)
bifunctional phosphoglucose/phosphomannose isomerase; K15916 glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] rbh
Bifunctional phosphoglucose/phosphomannose isomerase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IGM8_FLUTR rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_212_14
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8732..9247
DNA (516bp) protein (172aa)
Thioesterase superfamily protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IGM7_FLUTR
thioesterase superfamily protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_212_15
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9230..10210)
DNA (981bp) protein (327aa)
Glycosyl transferase family 9 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IGM6_FLUTR rbh
glycosyl transferase family 9 rbh
Glycosyl transferase family 9 {ECO:0000313|EMBL:AEA43643.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_212_16
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10329..10850
DNA (522bp) protein (174aa)
Ribosome maturation factor RimP n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIZ4_FLUTR
Ribosome maturation factor rimP; K09748 ribosome maturation factor RimP
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_212_17
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10858..12096
DNA (1239bp) protein (413aa)
NusA antitermination factor n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIZ5_FLUTR rbh
NusA antitermination factor; K02600 N utilization substance protein A rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_212_18
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12135..14972
DNA (2838bp) protein (946aa)
Translation initiation factor IF-2 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIZ6_FLUTR rbh
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
translation initiation factor 2 (bIF-2); K02519 translation initiation factor IF-2 rbh
scnpilot_solids2_trim150_scaffold_212_19
Myroides odoratimimus, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14996..15595
DNA (600bp) protein (200aa)
PhnA protein-like protein; K06193 phosphonoacetate hydrolase [EC:3.11.1.2]
Uncharacterized protein n=5 Tax=Myroides odoratimimus RepID=H1GQJ7_9FLAO
Putative alkylphosphonate utilization operon protein PhnA {ECO:0000313|EMBL:EHO06571.1}; TaxID=883154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides odoratimimus CIP 101113.;"
scnpilot_solids2_trim150_scaffold_212_20
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15669..17123
DNA (1455bp) protein (485aa)
RNA polymerase, sigma 54 subunit, RpoN/SigL n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHK0_FLUTR rbh
RNA polymerase sigma-54 subunit RpoN/SigL; K03092 RNA polymerase sigma-54 factor rbh
RNA polymerase, sigma 54 subunit, RpoN/SigL {ECO:0000313|EMBL:AEA43765.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_212_21
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

17123..17782
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHK1_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_solids2_trim150_scaffold_212_22
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

17825..18664
DNA (840bp) protein (280aa)
Peptidase M48 Ste24p n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IF91_FLUTR rbh
peptidase M48 Ste24p rbh
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_solids2_trim150_scaffold_212_23
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

18661..19422
DNA (762bp) protein (254aa)
arylformamidase (EC:3.5.1.9)
Probable arylformamidase n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XRC3_FLAIG
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_solids2_trim150_scaffold_212_24
unknown

Not on your lists

19557..19997
DNA (441bp) protein (147aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_212_25
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20055..20423
DNA (369bp) protein (123aa)
peptide-methionine (R)-S-oxide reductase (EC:1.8.4.11 1.8.4.12); K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
Peptide-methionine (R)-S-oxide reductase {ECO:0000313|EMBL:ADY52979.1}; EC=1.8.4.11 {ECO:0000313|EMBL:ADY52979.1};; EC=1.8.4.12 {ECO:0000313|EMBL:ADY52979.1};; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
Peptide-methionine (R)-S-oxide reductase n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SE53_PEDSD
scnpilot_solids2_trim150_scaffold_212_26
Sphingobacterium sp. ACCC 05744, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20575..21126)
DNA (552bp) protein (184aa)
Uncharacterized protein n=2 Tax=Elizabethkingia anophelis RepID=L8K3M3_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KGE13630.1}; TaxID=1229276 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ACCC 05744.;"
scnpilot_solids2_trim150_scaffold_212_27
Ancylostoma ceylanicum, Ancylostoma, Rhabditida, Chromadorea, Nematoda, Metazoa

Not on your lists

comp(21145..21633)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CI45_ELIME
Uncharacterized protein {ECO:0000313|EMBL:EPB65449.1}; Flags: Fragment;; TaxID=53326 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Ancylostomatoidea; Ancylostomatidae; Ancylostomatinae; Ancylostoma.;" source="Ancylostoma ceylanicum.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_212_28
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21645..22274)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Elizabethkingia meningoseptica 502 RepID=T0PN58_ELIME
Uncharacterized protein {ECO:0000313|EMBL:EQB91453.1}; TaxID=1355388 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica 502.;"
scnpilot_solids2_trim150_scaffold_212_29
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22255..22761)
DNA (507bp) protein (169aa)
RNA polymerase ECF-type sigma factor n=3 Tax=Elizabethkingia RepID=H0KPD7_9FLAO
RNA polymerase {ECO:0000313|EMBL:KGO11192.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
Displaying items 1-30 of 84 in total

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