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scnpilot_solids2_trim150_scaffold_714

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_714_1
unknown

Not on your lists

comp(3..1328)
DNA (1326bp) protein (442aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_714_2
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(1882..2829)
DNA (948bp) protein (316aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] rbh
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ID06_FLUTR rbh
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_solids2_trim150_scaffold_714_3
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2830..3849)
DNA (1020bp) protein (340aa)
PhoH family protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ID05_FLUTR rbh
PhoH family protein; K06217 phosphate starvation-inducible protein PhoH and related proteins rbh
PhoH family protein {ECO:0000313|EMBL:AEA44399.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_714_4
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3950..4813
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ID04_FLUTR
hypothetical protein; K09134 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA44398.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_714_5
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4815..5117
DNA (303bp) protein (101aa)
Antibiotic biosynthesis monooxygenase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ID03_FLUTR
Antibiotic biosynthesis monooxygenase
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_714_6
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

5132..6238
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI00036DEED2
carbohydrate esterase family 1 protein; K03932 polyhydroxybutyrate depolymerase
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_solids2_trim150_scaffold_714_7
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6257..7411)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IA61_FLUTR rbh
hypothetical protein; K03932 polyhydroxybutyrate depolymerase rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA45238.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_714_8
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7533..8237)
DNA (705bp) protein (235aa)
Oxidoreductase, FAD-binding protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VN97_9SPHI rbh
Oxidoreductase, FAD-binding protein {ECO:0000313|EMBL:EFK57394.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
oxidoreductase FAD-binding domain-containing protein
scnpilot_solids2_trim150_scaffold_714_9
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8317..9192)
DNA (876bp) protein (292aa)
Transcriptional regulator, AraC family n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VN96_9SPHI rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EFK57393.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
AraC family transcriptional regulator rbh
scnpilot_solids2_trim150_scaffold_714_10
unknown

Not on your lists

9273..9407
DNA (135bp) protein (45aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_714_trna_1
unknown

Not on your lists

comp(9477..9558)
DNA (82bp)
transferRNA Leu
scnpilot_solids2_trim150_scaffold_714_11
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9608..10834)
DNA (1227bp) protein (409aa)
ornithine aminotransferase (EC:2.6.1.13); K00819 ornithine--oxo-acid transaminase [EC:2.6.1.13] rbh
Ornithine aminotransferase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJD6_FLUTR rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_714_12
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10850..11479
DNA (630bp) protein (210aa)
NLP/P60 protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2III3_FLUTR
NLP/P60 protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_714_13
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11510..11764
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIN3_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_714_14
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11821..12234)
DNA (414bp) protein (138aa)
DoxX family protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QHZ8_SPILD
Contig34, whole genome shotgun sequence {ECO:0000313|EMBL:KIO77458.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
DoxX family protein; K15977 putative oxidoreductase
scnpilot_solids2_trim150_scaffold_714_15
unknown

Not on your lists

comp(12312..12986)
DNA (675bp) protein (225aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_714_16
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13149..13667
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Saprospira grandis (strain Lewin) RepID=H6L789_SAPGL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFC26680.1}; TaxID=984262 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Saprospira.;" source="Saprospira grandis (strain Lewin).;"
scnpilot_solids2_trim150_scaffold_714_17
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13751..14098)
DNA (348bp) protein (116aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IDC3_FLUTR
4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:AEA45538.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_714_18
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14224..17502)
DNA (3279bp) protein (1093aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IE74_FLUTR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA42392.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_714_19
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(17558..19267)
DNA (1710bp) protein (570aa)
Surface antigen (D15) n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJG6_FLUTR rbh
surface antigen (D15) rbh
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_solids2_trim150_scaffold_714_20
unknown

Not on your lists

19311..19454
DNA (144bp) protein (48aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_714_21
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19536..20294)
DNA (759bp) protein (253aa)
sulfate-transporting ATPase (EC:3.6.3.25); K02065 putative ABC transport system ATP-binding protein rbh
Sulfate-transporting ATPase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJJ3_FLUTR rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_714_22
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20291..21031)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJJ2_FLUTR rbh
hypothetical protein; K02066 putative ABC transport system permease protein rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_714_23
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21300..21932
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJJ1_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_714_24
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21949..22992
DNA (1044bp) protein (348aa)
mannose-1-phosphate guanylyltransferase (GDP) (EC:2.7.7.22); K00971 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] rbh
Mannose-1-phosphate guanylyltransferase (GDP) n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJJ0_FLUTR rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_714_25
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23012..23656)
DNA (645bp) protein (215aa)
Methyltransferase type 11 n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FMS9_FLAJ1 rbh
type 11 methyltransferase rbh
Methyltransferase type 11 {ECO:0000313|EMBL:ABQ03498.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
scnpilot_solids2_trim150_scaffold_714_26
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24041..25759
DNA (1719bp) protein (573aa)
Uncharacterized protein n=1 Tax=Joostella marina DSM 19592 RepID=I3CA14_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EIJ40457.1}; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marina DSM 19592.;"
TPR repeat-containing protein
scnpilot_solids2_trim150_scaffold_714_27
unknown

Not on your lists

26050..26349
DNA (300bp) protein (100aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_714_28
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

26357..27673
DNA (1317bp) protein (439aa)
Ig family protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SE31_PEDSD rbh
Ig family protein rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
Displaying 29 items

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