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scnpilot_solids2_trim150_scaffold_64_21

Organism: SCNPILOT_SOLID2_TRIM150_Flavobacteriia_39_50

near complete RP 52 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: 21714..23132

Top 3 Functional Annotations

Value Algorithm Source
RND efflux system, outer membrane lipoprotein, NodT family n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XS59_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 48.6
  • Coverage: 467.0
  • Bit_score: 428
  • Evalue 1.20e-116
Membrane protein {ECO:0000313|EMBL:KIA95327.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.9
  • Coverage: 467.0
  • Bit_score: 434
  • Evalue 1.70e-118
NodT family RND efflux system outer membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 48.6
  • Coverage: 467.0
  • Bit_score: 428
  • Evalue 3.70e-117

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Taxonomy

Pedobacter kyungheensis → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1419
ATGAAATTGAAATACATTATATACTTGGGAGCAGTAGCGTTTTTACTGACCAACTGCGGTTTGAAGGATCGCTACGAGCAGCCCAAAATAGAAGAGGAAAGCCAGAAAGGAATTGTCCGTGATAATGTTTCACGGGATTCCGTTTCATTAGCCGATATTTCCTGGAAAAGCTTCTTTACGGATCCCCAGCTTCAGTCGCTGATAGAAGAAGGGCTTAAAAATAATTATAATCTGCAGAATGCAGTCTTGCAGATCGCTGCTGCGGAAGCGGGATATAGACAAAGCAAGCAGGCCTTTTTTCCGACGCTGAATTTTGCTCCGACAGTGACAGCCAATAAAACATCAAAGAATTCCTTGAACTTTCCTTCAAATATCAATATCAACCTGAAAACAACAACCGTTTCTTTAGGATTTACGACCAATTGGGAAATTGATATCTGGGGAAAGCTGGCGAGTCAGAAAAGAGCTAATTTTGCAAACTGGCTTTCAATGCAGGCATCGAAAAATGCCGTACAGACAGCATTGATAGCAAGTATCGCTAATGCCTATTATTCATTACTGGCTTTAGACAGGCAATTACAGGTGACAGAAGAAACGATTCGCCTTCGTGAGGCAGCAGTGGTAACACTTAAAGCGCTCAATATTTCCAGCTCGACTACCAGTGCAGATGTAGCCCAGGCAGAAGCAAATCTGTATGCAGCGAAAGTAACGATCCCGGAAATAAAACAGGCAATCCGTGAAATGGAAAACCTGATCTGCACATTAATTGCTTCGCCGTTAAAGGAAATTCCCAGAGGGGCGCTGGACAACCAGACAATGAATAAAGAGCTGAAAACAGGAGTTCCCATGTTGCTGCTTTCAAATCGTCCGGATGTATTTGCTGCGGAAATGAATTTCCGTAAGGAATATGAATTGGTTAACGTTGCAAAAGCATCCTTTTATCCGAGCTTAAATATCAATTCGGGCTCCATTGGTATCAGCGCGCTGACCACGAGGACGCTGTTTGATATCAACTCATTTTTTGGAAACCTGGTTGCCGGGATCACTCAGCCGATCTTCAACAGAGGAACGCTGAAAGCCAATCTTAGACAACAGCGGGTACGCCAGGATATTGCGCTGAACAGCTTTAAAAATACACTTATCCAGGCCGGACAGGAAGTTTCCAATGCGATGTATGCTTATCAGACAATTGAGGACAAAAAAGAATTCAGGGAAAAACAAGTGGAATCATTGATGAAAGCGGTTGAAGCGAATCGAAAGCTGCTGGAATTTAGTAGCAGAACTACTTATACGGATGTGTTGGTTTCCGAGCAGAACCTGATCGTAGCCCAGCTTAGTCAGATCAATGATCAGCTATTGCAATACAAAGCAATGATTGAGCTTTACCGTGCTTTAGGTGGTGGTTGGAAAGGAGAATAA
PROTEIN sequence
Length: 473
MKLKYIIYLGAVAFLLTNCGLKDRYEQPKIEEESQKGIVRDNVSRDSVSLADISWKSFFTDPQLQSLIEEGLKNNYNLQNAVLQIAAAEAGYRQSKQAFFPTLNFAPTVTANKTSKNSLNFPSNININLKTTTVSLGFTTNWEIDIWGKLASQKRANFANWLSMQASKNAVQTALIASIANAYYSLLALDRQLQVTEETIRLREAAVVTLKALNISSSTTSADVAQAEANLYAAKVTIPEIKQAIREMENLICTLIASPLKEIPRGALDNQTMNKELKTGVPMLLLSNRPDVFAAEMNFRKEYELVNVAKASFYPSLNINSGSIGISALTTRTLFDINSFFGNLVAGITQPIFNRGTLKANLRQQRVRQDIALNSFKNTLIQAGQEVSNAMYAYQTIEDKKEFREKQVESLMKAVEANRKLLEFSSRTTYTDVLVSEQNLIVAQLSQINDQLLQYKAMIELYRALGGGWKGE*