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scnpilot_solids2_trim150_scaffold_64

Search features with annotation key words

Displaying items 1-30 of 148 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_64_1
unknown

Not on your lists

2..139
DNA (138bp) protein (46aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_64_2
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

226..666
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKE8_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA45074.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_64_3
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

663..1544
DNA (882bp) protein (294aa)
SSU ribosomal protein S6P modification protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKE9_FLUTR rbh
30S ribosomal protein S6P modification protein; K05844 ribosomal protein S6 modification protein rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_64_4
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1544..2527
DNA (984bp) protein (328aa)
Succinylglutamate desuccinylase/aspartoacylase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKF0_FLUTR rbh
Succinylglutamate desuccinylase/aspartoacylase; K06987 rbh
Succinylglutamate desuccinylase/aspartoacylase {ECO:0000313|EMBL:AEA45076.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_64_5
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2517..3425
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IB54_FLUTR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA42137.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_64_6
Flavobacteria bacterium BAL38, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


3530..3799
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=1 Tax=Flavobacteria bacterium BAL38 RepID=A3J4L6_9FLAO
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=391598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteria bacterium BAL38.;"
rpsO; 30S ribosomal protein S15; K02956 small subunit ribosomal protein S15
scnpilot_solids2_trim150_scaffold_64_7
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3881..6037
DNA (2157bp) protein (719aa)
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8); K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] rbh
Polyribonucleotide nucleotidyltransferase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICB5_FLUTR rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_64_8
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6227..6664
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Bergeyella zoohelcum CCUG 30536 RepID=K1LXV5_9FLAO
Strain DSM 12611 Contig07, whole genome shotgun sequence {ECO:0000313|EMBL:KIO53318.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_64_9
unknown

Not on your lists

6741..7607
DNA (867bp) protein (289aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_64_10
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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7990..8310
DNA (321bp) protein (107aa)
Phosphoribosylpyrophosphate synthetase n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S9X4_PEDSD
phosphoribosylpyrophosphate synthetase
Phosphoribosylpyrophosphate synthetase {ECO:0000313|EMBL:ADY52532.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
scnpilot_solids2_trim150_scaffold_64_11
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8708..9532
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KPH8_SOLCM rbh
short-chain dehydrogenase rbh
Uncharacterized protein {ECO:0000313|EMBL:AFD05876.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_solids2_trim150_scaffold_64_12
unknown

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comp(9605..11125)
DNA (1521bp) protein (507aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_64_13
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11126..13168)
DNA (2043bp) protein (681aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKE5_FLUTR rbh
peptidase S8 and S53 subtilisin kexin sedolisin rbh
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:AEA45071.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_64_14
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13379..13717
DNA (339bp) protein (113aa)
Putative transcriptional regulator n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CH27_9FLAO
Transcription factor, MBF1 {ECO:0000313|EMBL:BAP55089.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
scnpilot_solids2_trim150_scaffold_64_15
Hymenobacter sp. DG25B, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13920..15095
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Hymenobacter aerophilus RepID=UPI0003707413
Lipoprotein {ECO:0000313|EMBL:AIZ64965.1}; TaxID=1385664 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG25B.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_64_16
unknown

Not on your lists

15092..15973
DNA (882bp) protein (294aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_64_17
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16172..16552
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EFG5_RUNSL
GxxExxY protein {ECO:0000313|EMBL:KJF44207.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN14CK-3.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_64_18
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16835..17434
DNA (600bp) protein (200aa)
Regulatory protein TetR n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XS62_PEDHD
TetR family transcriptional regulator
Regulatory protein TetR {ECO:0000313|EMBL:ACU03407.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids2_trim150_scaffold_64_19
Flavobacterium indicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17431..18576
DNA (1146bp) protein (382aa)
Probable membrane fusion efflux lipoprotein n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XUU0_FLAIG rbh
membrane fusion efflux lipoprotein precursor; K03585 membrane fusion protein rbh
Probable membrane fusion efflux lipoprotein {ECO:0000313|EMBL:CCG53868.1}; TaxID=1094466 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9).;"
scnpilot_solids2_trim150_scaffold_64_20
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18590..21706
DNA (3117bp) protein (1039aa)
RND efflux system, inner membrane transporter CmeB n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FVB8_9FLAO rbh
RND efflux system, inner membrane transporter CmeB {ECO:0000313|EMBL:EIA07541.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
multidrug resistance protein. AcrB/AcrD/AcrF family protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family rbh
scnpilot_solids2_trim150_scaffold_64_21
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21714..23132
DNA (1419bp) protein (473aa)
RND efflux system, outer membrane lipoprotein, NodT family n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XS59_PEDHD
Membrane protein {ECO:0000313|EMBL:KIA95327.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
NodT family RND efflux system outer membrane lipoprotein
scnpilot_solids2_trim150_scaffold_64_22
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23176..24354
DNA (1179bp) protein (393aa)
Transporter, major facilitator family protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W8R3_9FLAO rbh
Membrane protein {ECO:0000313|EMBL:KFF12982.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
putative transport protein; K08156 MFS transporter, DHA1 family, arabinose polymer transporter rbh
scnpilot_solids2_trim150_scaffold_64_23
Chryseobacterium oranimense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24877..25881
DNA (1005bp) protein (335aa)
Putative membrane protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W7R1_9FLAO rbh
Putative inner membrane transporter YedA {ECO:0000313|EMBL:CEJ68625.1}; TaxID=1300143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium oranimense G311.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_64_24
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

25888..26835
DNA (948bp) protein (316aa)
Cysteine synthase (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) {ECO:0000313|EMBL:EAY25531.1}; EC=2.5.1.47 {ECO:0000313|EMBL:EAY25531.1};; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
putative cysteine synthase B; K12339 cysteine synthase B [EC:2.5.1.47]
cysteine synthase n=1 Tax=Flexithrix dorotheae RepID=UPI000366ACAC
scnpilot_solids2_trim150_scaffold_64_25
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26819..27244
DNA (426bp) protein (142aa)
Mov34/MPN/PAD-1 family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK64_NIAKG
Mov34/MPN/PAD-1 family protein
Mov34/MPN/PAD-1 family protein {ECO:0000313|EMBL:AEV96498.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_64_26
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

27257..28678
DNA (1422bp) protein (474aa)
Sulfur carrier protein adenylyltransferase ThiF n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZVV4_9BACT rbh
Sulfur carrier protein adenylyltransferase ThiF {ECO:0000313|EMBL:EON78280.1}; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacteriaceae bacterium AK24.;"
UBA/THIF-type NAD/FAD binding protein; K11996 adenylyltransferase and sulfurtransferase rbh
scnpilot_solids2_trim150_scaffold_64_trna_1
unknown

Not on your lists

28826..28896
DNA (71bp)
transferRNA Cys
scnpilot_solids2_trim150_scaffold_64_27
Rhodonellum psychrophilum, Rhodonellum, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

28932..29570
DNA (639bp) protein (213aa)
Peroxidase n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5C303_9BACT rbh
Peroxidase {ECO:0000313|EMBL:ERM83296.1}; TaxID=1123057 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Rhodonellum.;" source="Rhodonellum psychrophilum GCM71 = DSM 17998.;"
peroxidase rbh
scnpilot_solids2_trim150_scaffold_64_28
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29587..30057
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000381B690
Putative membrane protein {ECO:0000313|EMBL:CEA15765.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
CDP-alcohol phosphatidyltransferase
scnpilot_solids2_trim150_scaffold_64_29
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

30089..31114
DNA (1026bp) protein (342aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
ABC transporter n=1 Tax=Elizabethkingia meningoseptica 502 RepID=T0NLS0_ELIME rbh
ABC transporter; K02071 D-methionine transport system ATP-binding protein rbh
Displaying items 1-30 of 148 in total

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