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scnpilot_solids2_trim150_scaffold_2164_2

Organism: SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_39_37

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: comp(3793..4617)

Top 3 Functional Annotations

Value Algorithm Source
RteC protein n=2 Tax=Bacteroidetes RepID=D7VT63_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 82.1
  • Coverage: 274.0
  • Bit_score: 465
  • Evalue 5.00e-128
Tetracycline regulation of excision, RteC {ECO:0000313|EMBL:KEQ31130.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.4
  • Coverage: 274.0
  • Bit_score: 543
  • Evalue 2.00e-151
Tetracycline regulation of excision, RteC similarity KEGG
DB: KEGG
  • Identity: 76.7
  • Coverage: 275.0
  • Bit_score: 431
  • Evalue 1.50e-118
  • rbh

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Taxonomy

Pedobacter antarcticus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 825
ATGGACAAGTTATATCATGAAACATATCTTAAATTGGAAACTGCAATCCAGGAACTGGAGATTGAAACCGACTGCCCCATAAAAAGAATTGAAGCCGTTATACACCATATCATACAAAGCCTTGCCGACTTAAAGGACTTTGTACTGAAAAATGACTTTAAGAATATGGAAGAAGAAATCCATTTTTTCAAGTATCAGAAACCTATTATTGTTTCAAAGCTCATTTATTATAACGCCGTTTATAAAATCGAAACCAAAAAGCCTTACGGAGAGAAGCAAATAAAAAAGTTCCTCAACAAAGAATTGAACAAGCTCAAAAAATTCTTTGACAGCAACATTGATTTTTACAAGTATTACCGTAGTGGCAACTCTTTTCTCGATGAGAATTTTTTTATTCGGGGCAAACACGATATAAGGTTGTGGTTAGATACGTTTTATTTTGAAGCCGACCACCGTTTTTCCACTTCCCACGACTATAAGGTCGCTAAGATATTGGCAAACGATTTAATACAAGTTTATCTTGAAGACCAGCTAAATAACAAACATTATAAGAAAGCAAATAGTAAATCTCCTTTGAGCTGGACGGGAAGTAAAACAGCATTAACCGAGTTGATTTATGCACTCTACGCACAAGGTGTATTCAACAACGGAAATACCGATATAAAACTAATTGCCAAAACATTTGAAAGCACATTTAATATTGATTTGGGCGATTTCTACCATACGTTTATGGAATTGAAAGCCCGTAAAATTAACCGAACGAAATTCCTTGACATCCTGTGCGAAGCCCTGATAAAGAAAATGGACGAGCAAAACGAGAAGTAA
PROTEIN sequence
Length: 275
MDKLYHETYLKLETAIQELEIETDCPIKRIEAVIHHIIQSLADLKDFVLKNDFKNMEEEIHFFKYQKPIIVSKLIYYNAVYKIETKKPYGEKQIKKFLNKELNKLKKFFDSNIDFYKYYRSGNSFLDENFFIRGKHDIRLWLDTFYFEADHRFSTSHDYKVAKILANDLIQVYLEDQLNNKHYKKANSKSPLSWTGSKTALTELIYALYAQGVFNNGNTDIKLIAKTFESTFNIDLGDFYHTFMELKARKINRTKFLDILCEALIKKMDEQNEK*